Publications By Year

2013 2012 2011 2010 2009 2008 2007
2006 2005 2004 2003

2002

2001

2000

1999

1998

1997

1996

1995

1994

1993

1992

1991

     2013

Journals

1.      Hossam E. Abd El Munim, Amal A. Farag and Aly A. Farag. “Shape Representation and Registration in Vector Implicit Spaces: Adopting a Closed-Form Solution in the Optimization Process ", IEEE Trans. Pattern Anal. Mach. Intell. 35(3): 763-768 (2013)

2.      Aly S. Abdelrahim, Aly A. Farag, Shireen Y. Elhabian and Moumen T. El-Melegy “Shape-from-shading using sensor and physical object characteristics applied to human teeth surface reconstruction ", IET Computer Vision, 2013. 

3.      Shireen Y. Elhabian and Aly A. Farag. “Towards efficient image irradiance modelling of convex Lambertian surfaces under single viewpoint and frontal illumination ", IET Computer Vision, 2013. 

Conferences

1.      Aly Abdelrahim, Hossam Abdelmunim, James Graham and Aly Farag. "NOVEL VARIATIONAL APPROACH FOR THE PERSPECTIVE SHAPE FROM SHADING PROBLEM USING CALIBRATED IMAGES”, ICIP, 2013.

2.      Aly Abdelrahim, Ahmed Shalaby, Shireen Elhabian, James Graham and Aly Farag. "A 3D RECONSTRUCTION OF THE HUMAN JAW FROM A SINGLE IMAGE”, ICIP, 2013.

3.      Shireen Elhabian, Aly Abdelrahim, Aly Farag, David Tasman, Wael Aboelmaaty and Allen Farman . "Clinical Crowns Shape Reconstruction - an Image-Based Approach”, ISBI, 2013.

4.      Ahmed El-Barkouky, Ali Mahmoud, James Graham and Aly Farag. "AN INTERACTIVE EDUCATIONAL DRAWING SYSTEM USING A HUMANOID ROBOT AND LIGHT POLARIZATION”, ICIP, 2013.

5.      Aly Abdelrahim, Aly Farag, Ahmed Shalaby and Moumen El-Melegy . "2D-PCA Shape Models: Application to 3D Reconstruction of the Human Teeth from a Single Image ”, MICCAI-MCV 2013 Workshop on Medical Computer Vision , 2013.

6.      Travis R. Gault and Aly A. Farag. "A Fully Automatic Method to Extract the Heart Rate from Thermal Video ”, 9th IEEE Workshop on Perception Beyond the Visible Spectrum (PBVS) In conjunction with CVPR, 2013.

7.      Ali Mahmoud, Ahmed EL-Barkouky, Heba Farag, James Graham and Aly Farag. "A Non-invasive Method for Measuring Blood Flow Rate in Superficial Veins from a Single Thermal Image ”, 9th IEEE Workshop on Perception Beyond the Visible Spectrum (PBVS) In conjunction with CVPR, 2013.

8.      Mostafa Abdelrahman, Moumen El-Melegy and Aly Farag. "Heat Front Propagation Contours for 3D Face Recognition ”, BTAS , 2013.

9.      A. Cerri, S. Biasotti, Mostafa Abdelrahman, J. Angulo, K. Berger, L. Chevallier,Moumen El-Melegy, Aly  Farag, F. Lefebvre, A. Giachetti, H. Guermoud, Y.-J. Liu, S. Velasco-Forero, JR. Vigouroux, C.-X. Xu and J.-B. Zhang. "SHREC’13 Track: Retrieval on textured 3D models.”, Eurographics Workshop on 3D Object Retrieval , 2013.

10.      AJ. Machado, A. Ferreira, P. B. Pascoal, Mostafa Abdelrahman , M. Aono , Moumen El-Melegy, Aly  Farag, H. Johan, B. Li, Y. Lu and A. Tatsuma. "SHREC 2013: Retrieval of objects captured with low-cost depth-sensing cameras”, Eurographics Workshop on 3D Object Retrieval , 2013.

11.      Marwa Ismail, Aly Farag, M. Sabry Hassouna, Gerald Dryden, and Robert Falk. "Improved colon navigation for efficient polyp detection in virtual colonoscopy”, MICCAI 2013 Workshop on Abdominal Imaging: Computational and Clinical Applications, 2013.

12.      Marwa Ismail, Aly A Farag, Mohamed S. Hassouna, and Gerald W Dryden. "CLINICAL VALIDATION FOR VIRTUAL COLONOSCOPY TECHNIQUES”, 2013 Ky NanoSymposium.

 

     2012

1.      Eslam Mostafa, Asem Ali, Naif Alajlan and Aly Farag. “An Automatic Pose Invariant Face Recognition At Distance Approach”, ECCV, 2012.

2.      Shireen Elhabian, Eslam Mostafa, Ham Rara, Aly Farag. “Non-Lambertian Model-based Facial Shape Recovery from Single Image Under Unknown General Illumination”, CRV, 2012.

3.      Shireen Elhabian and Aly Farag. “Modeling Image Irradiance Under Natural Illumination And Isotropic Surface Reflectance”, ICIP, 2012.

4.      Eslam Mostafa, Ahmed Shalaby, Aly Farag. “Complex Bingham Distribution for Facial Feature Detection, in workshop what is in a face", ECCV, 2012.

5.      Eslam Mostafa, Moumen El-Melegy, and Aly Farag. “Passive Single Image-based Approach for Camera Steering in Face Recognition at-a-Distance Applications”, BTAS, 2012.

6.      Eslam Mostafa, Ahmed El-Barkouky, Ham Rara and Aly Farag. “Rejecting Pseudo-Faces using the Likelihood of Facial Features and Skin”, BTAS, 2012. 

7.      Eslam A. Mostafa and Aly A. Farag. “Dynamic Weighting of Facial Features for Automatic Pose-Invariant Face Recognition ", CRV, 2012. 

8.      Aly Abdelrahim, Aly Farag, Shireen Elhabian, Eslam Mostafa and Wael Aboelmaaty. "Occlusal Surface Reconstruction Of Human Teeth From A Single Image Based On Object And Sensor Physical Characteristics”, ICIP, 2012.

9.      Aly Abdelrahim, Moumen T. El-Melegy; and Aly A. Farag . "Realistic 3D reconstruction of the human teeth using shape from shading with shape priors," Workshop on Medical Computer Vision, CVPR, 2012.

10.  Mostafa Abdelrahman, Moumen T. El-Melegy, Aly A. Farag. “Heat Kernels for Non-Rigid Shape Retrieval: Sparse Representation and Efficient Classification”, CRV, 2012.

11.  Mostafa Abdelrahman, Asem M. Ali, Ahmed A. Farag, Manuel Casanova, Aly A. Farag. “New Approach for Classification of Autistic vs. Typically Developing Brain Using White Matter Volumes”, CRV, 2012

12.  Mostafa Abdelrahman, Asem Ali, Shireen Elhabian, Ham Rara, and Aly A. Farag. “A Passive Stereo System for 3D Human Face Reconstruction and Recognition-at-a-Distance”. CVPR Workshop on Biometrics, 2012.

13.  Mostafa Abdelrahman, Moumen T. El-Melegy, Aly A. Farag. “3D Object Classification using Scale Invariant Heat Kernels with Collaborative Classification”. NORDIA ECCV workshop , 2012.

14.  Ahmed Shalaby, Aly A. Farag, Adrianne Ross and Todd Hockenbury, “2D-3D Registration of Human ankle using X-ray and CT images,” CIBEC,  2012.

15.  Ahmed Shalaby, Melih Aslan, Hossam Abdelmunim and Aly A. Farag, “2D-PCA based shape prior for level sets segmentation framework of the vertebral body”, CIBEC, 2012.

16.  Ahmed Shalaby, Ali Mahmoud, Eslam Mostafa, Ahmed Abdoulmalek, and Aly A. Farag, “Segmentation framework of vertebral body using 2D-PCA”, STEM, 2012.

17.  Ahmed Shalaby, Ali Mahmoud, Ahmed Abdoulmalek, and Aly A. Farag, “Registration of Human Foot using X-ray and CT images”, STEM, 2012.

18.  Ali H. Mahmoud, Moumen T. El-Melegy and Aly A. Farag, “Direct method for shape recovery from polarization and shading”, ICIP, 2012.

19.  Marwa Ismail, Shireen Elhabian, Aly Farag and Gerald W. Dryden. “Fully Automated 3D Colon Segmentation for Early Detection of Colorectal Cancer based on Convex Formulation of the Active Contour Model”, CVPR Workshop on Medical Computer Vision, 2012.

20.  Marwa Ismail, Shireen Elhabian, Aly Farag, Gerald Dryden, and A. Seow, “3D Automated Colon Segmentation for Efficient Polyp Detection,” CIBEC, 2012.

21.  Ahmed El-barkouky, Ham Rara, Aly Farag and Phil Womble, "Face detection at a distance using saliency maps, CVPR Workshop in Biometrics, 2012.

22.  Travis Gault, Aly Farag. ” Computationally Light Forehead Segmentation From Thermal Images”, ICIP, 2012.

23.  Moumen T. El-Melegy, and  Aly A. Farag. “ Can Lens Distortion Be Calibrated From An Image Of A Smooth, Textureless Lambertian Surface?”, ICIP, 2012

24.  Aly Farag, Shireen Elhabian, Aly Abdelrahim, Wael Aboelmaaty, Allan Farman and David Tazman. “Model-based Human Teeth Shape Recovery from a Single Optical Image With Unknown Illumination”, MICCAI Medical Computer Vision Workshop MCV, 2012.

 

    2011

 
  1. Shireen Elhabian, Ham Rara and Aly Farag, “Towards Accurate and Efficient Representation of Image Irradiance of Convex-Lambertian Objects Under Unknown Near Lighting,” International Conference of Computer Vision (ICCV), pp. 1732 - 1737, Nov 2011.

  2. Melih S. Aslan, Hossam Abdelmunim, and Aly A. Farag, "A probabilistic shape-based segmentation using level sets," 1st IEEE Workshop on Information Theory in Computer Vision and Pattern Recognition (ICCV workshop), pp. 1372 - 1377, Oct 2011.

  3. Ham Rara, Aly Farag, and Todd Davis,  “Model-based 3D Shape Recovery from Single Images of Unknown Pose and Illumination Using a Small Number of Feature Points,” International Joint Conference on Biometrics (IJCB), pp. 1-7, Oct 2011.

  4. Jonthan Parris, Micheal Wilber, Brian Helfin, Ham Rara, Ahmed El-barkouky, Aly Farag, et al., Face and Eye Detection on Hard Datasets,” International Joint Conference on Biometrics (IJCB), pp. 1-10, Oct 2011.

  5. Mostafa Abdelrahman, Asem M. Ali, Shireen Y. Elhabian, Aly A. Farag, "Solving Geometric Co-registration Problem of Multi-spectral Remote Sensing Imagery Using SIFT-Based Features toward Precise Change Detection," Proc. of  International Symposium on Visual Computing (ISVC), pp.607-616, Sept 2011.

  6. Amal Farag,  Hossam Abdelmunim, James Graham, Aly A. Farag, Salwa Elshazly, Asem M. Ali, Ahmed Farag, Sabry Al Mogy,Mohamed Al Mogy , Robert Falk ,Sahar Al Jafary, Hani Mahdi, and Rebecca Milam, “Variational Approaches For Segmentation Of Lung Nodules,” IEEE International Conference on Image Processing (ICIP), pp. 2157 - 2160,  Sept 2011.

  7. Shireen Elhabian, Ham Rara and Aly Farag, “On The Use of Hemispherical Harmonics For Modeling Images of Object Under Known Distant Illumination,” International Conference of Image Processing (ICIP), pp. 1109 - 1112, Sept 2011.

  8. Melih S. Aslan, Hossam Abdelmunim, Aly A. Farag, Ben Arnold, Eslam Mustafa, and Ping Xiang,A new shape based segmentation framework using statistical and variational methods,” Proc. of 2011 IEEE International Conference on Image Processing (ICIP), pp. 717-720, Sept 2011.

  9. Melih S. Aslan, Eslam Mustafa,Hossam Abdelmunim, Ahmed Shalaby, Aly A. Farag, and Ben Arnold, “A novel probabilistic simultaneous segmentation and registration using level set,” Proc. of 2011 IEEE International Conference on Image Processing (ICIP), pp. 2161 - 2164, Sept 2011.

  10. Hossam Abdelmunim, D. Chen, Aly A. Farag, R. Pusateri, C. Carter, M. Miller, A. Farman, D. Tasman, “A 3d human teeth database construction based on a point-based shape registration, ” Proc. Of 2011 IEEE International Conference on Image Processing (ICIP), pp. 1617 - 1620, Sept 2011.

  11. Shireen Elhabian, Ham Rara and Aly Farag, “Towards Effcient and Compact Phenomenological Representation of Arbitrary Bidirectional Surface Reflectance,” British Machine Vision Conference (BMVC), vol. 89, pp 1-11, Aug 2011.

  12. Aly Abdelrehim, Mostafa Abderahman, Hossam Abdelmunim, Aly Farag, and Mike Miller,  "Novel Image-Based 3D Reconstruction of the Human Jaw using Shape from Shading and Feature Descriptors,'' The 22nd British Machine Vision Conference, (BMVC), vol. 41, pp. 1-11, Aug 2011.

  13. Amal Farag,  Asem Ali, Shireen Elhabian, and Aly A Farag, Probability density estimation by linear combinations of Gaussian kernels- generalizations and algorithmic evaluation, IEEE International Conference on Multimedia Technology (ICMT), pp. 6491-6494, July 2011.

  14. Ali Mahmoud, Aly Farag, Aly Abdelrahim, Said Elnoubi, "A channel estimation technique in OFDM systems using no pilots," IEEE International Conference on Multimedia Technology (ICMT), pp. 6680 - 6683, July  2011.

  15. Travis Gault, Mostafa Eslam, Ahmed Farah, Aly Farag, "Less is more: Cropping to improve facial recognition with thermal images," IEEE International Conference on Multimedia Technology (ICMT), pp. 6445 - 6449, July  2011.

  16. Aly Abdelrahim, Mostafa Abdelrahman, Ali Mahmoud, Aly Farag, "Image retrieval based on content and image compression," IEEE International Conference on Multimedia Technology (ICMT), pp. 6696 - 6703 , July  2011.

  17. Mostafa Abdelrahman, Asem Ali, and Aly Farag, "Precise change detection in multi-spectral remote sensing imagery using SIFT-based registration," IEEE International Conference on Multimedia Technology (ICMT), pp. 6238 - 6242, July  2011.

  18. Mostafa Abdelrahman, Shireen Elhabian, Asem Ali, and Aly Farag, "Face recognition at-a-distance using texture, sparse-stereo, and dense-stereo," IEEE International Conference on Multimedia Technology (ICMT), pp. 6690 - 6695, July  2011.

  19. Ahmed Shalaby, Asem Ali, Aly A. Farag, “Simultaneous Identification and Tracking of Moving Targets,” Proc. of 8th IEEE Workshop on Object Tracking and Classification Beyond the Visible Spectrum (OTCBVS), pp. 49 - 54, June 2011.

  20. Shireen Elhabian, Ham Rara, Aly Farag, “Modeling Lambertian Surfaces Under Unknown Distant Illumination Using Hemispherical Harmonics,” Eighth Canadian Conference on Computer and Robot Vision (CRV), pp. 293 - 300, May 2011.

  21. Shireen Elhabian, Ham Rara, Asem Ali, Aly Farag, “Illumination-invariant Statistical Shape Recovery with Contiguous Occlusion,” Eighth Canadian Conference on Computer and Robot Vision (CRV), pp. 301 - 308, May 2011.

  22. Hossam Abdelmunim and Aly A. Farag, "Elastic Shape Registration using an Incremental Free Form Deformation Approach with the ICP Algorithm", Eighth Canadian Conference on Computer and Robot Vision (CRV), pp. 212 - 218, May 2011.

  23. Amal Farag,  Aly A Farag, Hossam Abdelmunim, Asem Ali, James Graham, Salwa Elshazly, Ahmed Farag, Sabry Al Mogy, Mohamed Al Mogy , Sahar Al Jafary, Hani Mahdi, Robert Falk and Rebecca Milam, “Feature Descriptors For Nodule Type Classification,” Proc. of 2011Computer Assisted Radiology and Surgery (CARS), 2011.

  24. Aly A. Farag, Dongqing Chen, Hossam Abdelmunim, Ross Pusateri, Mike Miller, Allan Farman, David Tasman, “Building a Discriminative Dental Database for Dental Image Analysis,Proc. of 2011Computer Assisted Radiology and Surgery, CARS, 2011.

  25. Amal Farag, Asem Ali, James Graham, Aly Farag, Salwa Elshazly and Robert Falk, “Evaluation of geometric feature descriptors for detection and classification of lung nodules in low dose ct scans of the chest,” International Symposium on Biomedical Imaging (ISBI-11), pp. 169 - 172, March 2011.

  26. Melih S. Aslan, Aly A. Farag, Ben Arnold, and Ping Xiang, “Segmentation of vertebrae using level sets with expectation maximization algorithm,” Proc. of 2011 IEEE International Symposium on Biomedical Imaging (ISBI), pp. 2010-2013, March 2011.

  27. Melih S. Aslan, Asem Ali, Aly A. Farag, Hossam Abdelmunim, Ben Arnold, and Ping Xiang, “A new segmentation and registration approach for vertebral body analysis,” Proc. of 2011 IEEE International Symposium on Biomedical Imaging (ISBI), pp. 2006-2009, March 2011.

    2010

 
  1. Amal Farag, Asem Ali, Shireen Elhabian, James Graham, Aly Farag, and Robert Falk, “Feature-Based Lung Nodule Classification,” Proc. of  International Symposium on Visual Computing (ISVC), pp. 79-88, 2010.

  2. Ahmed Farag, Shireen Elhabian,  Mostafa Abdelrahman, James Graham, Aly Farag, Dongqing Chen, and Manuel F. Casanova, “Surface Modeling of the Corpus Callosum,”  Proc. of International Symposium on Visual Computing (ISVC), pp. 9-18, 2010.

  3. Ham Rara, Shireen Elhabian, Asem Ali, Mike Miller, Thomas Starr, and Aly Farag, "Face Recognition at-a-Distance using Texture and Sparse-Stereo Reconstruction," Proc. of IEEE Fourth International Conference on Biometrics: Theory, Applications and Systems (BTAS), pp. 1221-1224, 2010.

  4. Melih S. Aslan, Asem Ali, Ham Rara, and Aly A. Farag, “An Automated Vertebra Identification and Segmentation in CT Images,” Proc. of 2010 IEEE International Conference on Image Processing (ICIP), pp. 233-236, 2010.

  5. Melih S. Aslan, Asem Ali, Dongqing Chen, Ben Arnold, Aly A. Farag, and Ping Xiang, “3D Vertebrae Segmentation Using Graph Cuts With Shape Prior Constraints,”  Proc. of 2010 IEEE International Conference on Image Processing (ICIP), pp. 2193-2196, 2010.

  6. Amal Farag, James Graham, and Aly Farag, “Robust Segmentation of Lung Tissue In Chest CT Scanning,” Proc. of 2010 IEEE International Conference on Image Processing (ICIP), pp. 2249-2252, 2010.

  7. Amal Farag, James Graham and Aly Farag, “Statistical Modeling of the Lung Nodules in Low Dose Computed Tomography Scans of the Chest,” Proc. of 2010 IEEE International Conference on Image Processing (ICIP), pp. 4281-4284, 2010.

  8. Cambron N. Carter, Rosario J. Pusateri, Dongqing Chen, Abdelreheim H. Ahmed, Aly A. Farag, "Shape from shading for hybrid surfaces as applied to tooth reconstruction," Proc. of 2010 IEEE International Conference on Image Processing (ICIP), pp. 4049-4052, 2010. 

  9. Ham Rara, Shireen Elhabian, Thomas Starr, and Aly Farag, "3D Face Recovery from Intensities of General and Unknown Lightning Using Partial Least Squares," Proc. of 2010 IEEE International Conference on Image Processing (ICIP), pp. 4041-4044, 2010.

  10. Amal Farag, Shireen Elhabian, James Graham, Aly Farag, and Robert Falk, “Toward Precise Pulmonary Nodule Descriptors for Nodule Type Classification,” Proc. of the 13th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), pp. 626-633, 2010.

  11. Amal Farag, James Graham, Aly Farag, Salwa Elshazly, and Robert Falk, “Parametric and Non-Parametric Nodule Models: Design and Evaluation,” Proc. of Third International Workshop on Pulmonary Image Processing in conjunction with MICCAI, pp. 151-162, 2010.

  12. Amal Farag, Shireen Elhabian, James Graham, Aly Farag, Salwa Elshazly, Robert Falk, Hani Mahdi, Hossam Abdelmunim, and Sahar Al-Ghaafary, “Modeling of the Lung Nodules for Detection in LDCT Scans,Proc. of the 32nd IEEE Engineering in Medicine and Biology Society (EMBC), 2010.

  13. Ahmed Farag, Shireen Elhabian,  Mostafa Abdelrahman, James Graham, Aly Farag, Dongqing Chen, and Manuel F. Casanova, “Shape Modeling of the Corpus Callosum,” Proc. of the 32nd IEEE Engineering in Medicine and Biology Society (EMBC), pp. 4288-4291, 2010.

  14. Amal Farag, James Graham, Salwa Elshazly, and Aly Farag, “Data-Driven Lung Nodule Models for Robust Nodule Detection in Chest CT,” Proc. of 20th International Conference on Pattern Recognition (ICPR), pp. 2288-2291, 2010.

  15. Ham Rara, Asem Ali, Shireen Elhabian, Thomas Starr, and Aly A. Farag, "Face Recognition at-a-Distance using Texture, Dense- and Sparse-Stereo Reconstruction," Proceedings of the International Conference on Pattern Recognition (ICPR), pp. 1221-1224, 2010.

  16. Melih S. Aslan, Asem Ali, Aly A. Farag, Ham Rara, Ben Arnold, and Ping Xiang, "3D Vertebral Body Segmentation Using Shape Based Graph Cuts," Proceedings of the International Conference on Pattern Recognition (ICPR), pp. 3951-3954, 2010.

  17. Melih S. Aslan, Asem Ali, Aly A. Farag, Ben Arnold, Dongqing Chen, and Ping Xiang, "3D Vertebrae Segmentation in CT Images with Random Noises" Proceedings of the International Conference on Pattern Recognition (ICPR), pp.2290-2293, 2010.

  18. Travis R. Gault, Nicholas Blumenthal, Aly A. Farag and Tom Starr, "Extraction of the Superficial Facial Vasculature, Vital Signs Waveforms and Rates Using Thermal Imaging," Proc. of the 6th IEEE International Workshop on Object Tracking and Classification in and Beyond the Visible Spectrum (OTCBVS), pp. 1-8, 2010.

  19. Melih S. Aslan, Asem Ali, Ham Rara, Ben Arnold, Rachid Fahmi, Aly Farag, and Ping Xiang, “A Novel, Fast, and Complete 3D Segmentation of Vertebral Bones,” Proc. of the International Conference on Acoustic, Speech, and Signal Processing (ICASSP), pp. 654-657, 2010.

  20. A Ali, M. Miller, T. Starr, and A. Farag, “Passive Stereo-based 3D Human Face Reconstruction at a Distance,” Technical Report, 4 pages, CVIP Lab, Univ. of Louisville, January, 2010.

     2009

  1. M. Sabry Hassouna and A. A. Farag, TPAMI-0845-1206 - Variational Curve Skeletons Using Gradient Vector Flow,” IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol. 31,  No.12, pp. 2257 - 2274, Dec. 2009.

  2. M. Sabry Hassouna, Alaa Abdel-Hakim and Aly A. Farag “PDE-Based Robust Robotic Navigation,” Image, Vision and Computing, Vol.27, No. 1-2, pp. 10-18, January 2009.

  3. Dongqing Chen, Aly A. Farag, Robert L. Falk, and Gerald W. Dryden, "Variational Approach Based Image Pre-processing Techniques for Virtual Colonoscopy," Book Chapter of Biomedical Image Analysis and Machine Learning Technologies: Application and Techniques, Editors: Fabio Gonzalez and Eduardo Romero, 2009. 

  4. H. Rara, S. Elhabian, A. Ali, M. Miller, T. Starr, and A. A. Farag, "Face recognition at a distance based on sparse-stereo reconstruction, " IEEE CVPR Biometrics Workshop, 2009.

  5. Asem Ali, Amal Farag and Aly Farag "Labelling Color Images by Modelling the Colors Density Using A Linear Combination of Gaussians and EM Algorithm," 2009 IEEE International Conference on Image Processing (ICIP), Nov. 7 – Nov. 10, 2009, Cairo, Egypt.

  6. Melih S. Aslan, Aly A. Farag, Hossam Abdelmunim, and Mohamed A. El-Ghar, Assessment of kidney function using dynamic contrast enhanced MRI techniques,Book Chapter of Biomedical Image Analysis and Machine Learning Technologies: Application and Techniques, Editors: Fabio Gonzalez and Eduardo Romero, 2009. 

  7. Dongqing Chen, Rachid Fahmi, Aly A. Farag, Robert L. Falk, and Gerald W. Dryden, ”Accurate and Fast 3D Colon Segmentation in CT Colonography,” The Sixth IEEE International Symposium on Biomedical Imaging (ISBI’09), Boston, MA, June 28 - July 1, 2009, pp.490-493.

  8. Melih S. Aslan, Asem Ali, Ben Arnold, Rachid Fahmi, Aly A. Farag, and Ping Xiang, Segmentation of trabecular bones from vertebral bodies in volumetric CT spine images,” Proc. of IEEE International Conference on Image Processing (ICIP’09),Cairo, Egypt, November 7-11, 2009.

  9. Dongqing Chen, Aly A. Farag, Robert L. Falk, and Gerald W. Dryden, ”A Variational Framework for 3D Colonic Polyp Visualization in Virtual Colonoscopy,” Proc. of IEEE International Conference on Image Processing (ICIP’09),Cairo, Egypt, November 7-11, 2009.

  10. Dongqing Chen, Aly A. Farag, Robert L. Falk, and Gerald W. Dryden, ”On Clinical Validation of Fly-Over Visualization Technique for Virtual Colonoscopy,” Proc. of IEEE International Conference on Image Processing (ICIP’09),Cairo, Egypt, November 7-11, 2009.

  11. Melih S. Aslan, Asem Ali, Ham Rara, Ben Arnold , Aly A. Farag, Rachid Fahmi, and Ping Xiang , A Novel 3D Segmentation of Vertebral Bones from Volumetric CT Images Using Graph Cuts,” 5th International Symposium on Visual Computing (ISVC-09) , Las Vegas, Neveda, Nov 30-Dec 2, 2009.

  12. H. Rara, S. Elhabian, T. Starr, and A. Farag, “Face reconstruction and recognition using a statistical model combining shape and spherical harmonics,” IEEE SOUTHEASTCON 2009, March 2009.

  13. H. Rara, S. Elhabian, T. Starr, and A. Farag, “Model-Based Shape Recovery From Single Images Of General And Unknown Lighting,”  2009 IEEE International Conference on Image Processing (ICIP), Nov. 7 – Nov. 10, 2009, Cairo, Egypt.

  14. H. Rara, S. Elhabian, A. Ali, M. Miller, T. Starr, and A. Farag, “Distant Face Recognition Based On Sparse Stereo Reconstruction,”  2009 IEEE International Conference on Image Processing (ICIP), Nov. 7 – Nov. 10, 2009, Cairo, Egyp.

  15. Amal Farag, James Graham, Aly Farag and Robert Falk, "Lung Nodule Modeling – A Data-Driven Approach," 5th International Symposium on Visual Computing (ISVC09), Nov. 30 – Dec. 2, 2009, Las Vegas, Nevada, USA.

  16. H.Rara, S. Elhabian, Asem Ali, T. Gault, M. Miller, T. Starr, and A. Farag, “A Framework for Long Distance Face Recognition using Dense- and Sparse-Stereo Reconstruction,”  5th International Symposium on Visual Computing (ISVC09), Nov. 30 – Dec. 2, 2009, Las Vegas, Nevada, USA.

  17. Ben Arnold, Ping Xiang, Clarence Garrett, Songshou Mao, Melih Aslan, Matthew J. Budoff, and Aly Farag, "Automated Bone Density Measurements and Assessment of Vertebral Fractures from Routine MDCT Exams Performed for Other Diagnostic Objectives," RSNA, November 29-December 4, McCormick Place, Chicago, 2009.
     

     2008

  1. H. Shi, Aly A. Farag, R. Fahmi and D. Chen “Validation of Finite Element Models of Liver Tissue using Micro-CT and CBCT,” IEEE Transactions on Biomedical Engineering – Vol. 55, No. 3, pp. 978-984, March 2008.

  2. Asem Ali, Aly A. Farag and Georgy Gimel’farb,” Optimizing Binary MRFs with Higher Order Cliques,” Proceddings of the European Conference on Computer Vision, ECCV-08, Marseille, France, pp. October 12-18, 2008.

  3. Hossam Abdelmunim and Aly Farag,” A New CAD System for the Evaluation of Renal Rejection Using DCE-MRI” Proc. of IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA’08), Anchorage, Alaska, June 27-28, 2008.

  4. Dongqing Chen,  Aly  A. Farag, M. Sabry Hassouna, Robert Falk, and Gerald Dryden, “Curvature Flow Based 3D Surface Evolution Model for Polyp Detection and Visualization in CT Colonography,” T. Smolinski et al., Editors, Computational Intelligence in Biomedicine and Bioinformatics, Chapter 8, pp. 201-222,  Springer-Verlag, Berlin, October  2008.

  5. Asem Ali, Aly A. Farag and Georgy Gimel’farb, “Analytical Method for MGRF Potts Model Parameters Estimation,” Proceedings of the International Conference on Pattern Recognition (ICPR-08), Tampa, Florida, December 8-11, 2008.

  6. Alaa Abdelhakim and Aly A. Farag, “A Novel Stability Quantification of Detected Interest Points in Scale-Space,” Proceedings of the International Conference on Pattern Recognition (ICPR-08), Tampa, Florida, December 8-11, 2008.

  7. Aly A. Farag “A Survey and Recent Advances in Image Registration and Fusion (Full Day)” with H. Abdelmunim, G. Carneiro, A. Goshtasby, R. D. Eastman, J. Flusser, A. Leow, F. Sroubek, B. Vemuri, I. Yanovsky,  and B. Zitova,” International Conference on Computer Vision and Pattern Recognition, CVPR 2008, Egan Convnection Center, Anchorage, Alaska, June 24-26, 2008.

  8. Amal Farag, Shireen Elhabian, Abdelrehim Ahmed and Aly A. Farag, “Noise Analysis of SFS Algorithm Formulated Under Various Imaging Conditions,4rd International Symposium on Visual Computing (ISVC-08), Las Vegas, Nevada, USA, pp. 803-812, December 1-3, 2008.

  9. Rachid Fahmi and Aly A. Farag, “A Novel Shape Registration Framework and Its Application to 3D Face Recognition in the Presence of Expressions,” 4th International Symposium on Visual Computing (ISVC-08), Las Vegas, pp. 287-296, December 1-3, 2008.

  10. Asem Ali and Aly A. Farag, “Automatic Lung Segmentation of Volumetric Low-Dose CT Scans Using Graph Cuts,” 4th International Symposium on Visual Computing (ISVC-08), Las Vegas, pp. 258-267, December 1-3, 2008.

  11. Asim Ali and Aly A. Farag, “A Novel Framework for N-D Multimodal Image Segmentation Using Graph Cuts,” Proc. of IEEE International Conference on Image Processing (ICIP’08), San Diego, California, pp. 729-732, October 12-15, 2008.

  12. Rachid Fahmi and Aly A. Farag, “A Fast Level Set Algorithm For Shape-Based Segmentation with Multiple Selective Priors,” Proc. of IEEE International Conference on Image Processing (ICIP’08), San Diego, California, October 12-15, 2008.

  13. Asim Ali and Aly A. Farag, “Density Estimation using a new AIC-type Criterion and the EM algorithm for a Linear Combination of Gaussians,” Proc. of IEEE International Conference on Image Processing (ICIP’08), San Diego, California, pp. 3024-3027, October 12-15, 2008.

  14. Abdelrehim Ahmed, Aly Farag and Thomas Starr, “A NEW SYMMETRIC SHAPE FROM SHADING ALGORITHM WITH AN APPLICATION TO 3-D FACE RECONSTRUCTION,” Proc. of IEEE International Conference on Image Processing (ICIP’08), San Diego, California, pp. 201-204, October 12-15, 2008.

  15. Dongqing Chen, Aly Farag, Robert Falk and Gerald Dryden, “GAUSSIAN CURVATURE FLOW MODEL FOR COLONIC POLYP DETECTION IN CT COLONOGRAPHY,” Proc. of IEEE International Conference on Image Processing (ICIP’08), San Diego, California, pp. 2988-2991, October 12-15, 2008.

  16. Dongqing Chen, Hossam Abdelmunim, Aly A. Farag, Robert Falk and Gerald Dryden, “Segmentation of Colon Tissue in CT Colonography Using Adaptive Level Sets Method,” Proceedings of MICCAI 2008 Workshop: Computational and Visualization Challenges in the New Era of Virtual Colonoscopy, H. Yoshida, Ed.,  pp. 108-115, September 6, 2008, New York City, NY.

  17. A. A. Farag, H. Shi, D. Chen, R. Bradshaw, M. Voor, “Material parameter estimation in linear elastic modeling of liver tissue,” Proceedings of the 22nd International Conference on Computer-Assisted Radiology and Surgery (CARS-08), June 25-28, 2008. Barcelona, Spain.

  18. A. A. Farag, D. Chen, H. Hassan, "3D colon object reconstruction framework in CT colonography,” Proceedings of the 22nd International Conference on Computer-Assisted Radiology and Surgery (CARS-08), June 25-28, 2008. Barcelona, Spain.

  19. Rachid Fahmi, Anne Jerebko, Matthias Wolf, Aly A. Farag, “Robust segmentation of tubular structures in medical images, Proceedings of Society of Photographic Instrumentation Engineer (SPIE), 2008.

     2007

  1. M. Sabry Hassouna and Aly A. Farag, “Multi-Stencils Fast Marching Methods: A Highly Accurate Solution to the Eikonal Equation on Cartesian Domain,” IEEE Transactions on Pattern Analysis and Machine Intelligence – Vol. 29, No. 9, pp. 1563-1574, September 2007.

  2. Hossam Abd EL Munim and Aly A. Farag, “Curve/Surface Representation and Evolution using Vector Level Sets with Application to the Shape-based Segmentation Problem," IEEE Transactions on Pattern Analysis and Machine Intelligence –  Vol. 29, No. 6, pp. 945-958, June 2007. 

  3.  Manuel F. Casanova, Aly Farag, Ayman EL-BAZ, Meghan Mott, Hossam Hassan, Rachid Fahmi, Andrew E. Switala, ”Abnormalities of the Gyral Window in Autism: A Macroscopic Correlate to a Putative Minicolumnopathy ,” Journal of Special Education and Rehabilitation, pp. 1:85-101, 2007. 

  4. Seniha E. Yuksel, Ayman El-Baz, Aly A. Farag, Mohamed El-Ghar, Tarek Eldiasty and Mohamed A. Ghoneim, A Kidney Segmentation Framework for Dynamic Contrast Enhanced Magnetic Resonance Imaging, Journal of Vibration and Control, 13(9–10): 1505–1516, 2007. 

  5. Jasjit S. Suri and Aly A. Farag, Ed., Deformable Models I: Biomedical and Clinical Applications (Topics in Biomedical Engineering. International Book Series), Springer-Verlag, New York, July 2007 (Approx. 575 pp.).  ISBN: 978-0-387-31201-9. 

  6. Jasjit S. Suri and Aly A. Farag, Deformable Models II: Theory & Biomaterial Applications (Topics in Biomedical Engineering. International Book Series) Springer-Verlag, New York, July 2007 (Approx. 600 pp.). ISBN: 978-0-387-31204-0. 

  7. M. Sabry Hassouna and Aly  A. Farag, “Accurate Tracking of Monotically Advanced Fronts,” J. Suri and A. Farag, Editors, Deformable Models I: Biomedical and Clinical Applications, Chapter 8, pp. 235-258,  Springer-Verlag, New York, July 2007. 

  8. Ayman El-Baz, Aly A. Farag, Seniha E. Yuksel, Mohamed E. Aboel Ghar, Tarek A. Eldiasty, and Mohamed A. Ghoneim, “Application of Deformable Models for the Detection of Acute Renal Rejection,” J. Suri and A. Farag, Editors, Deformable Models I: Biomedical and Clinical Applications, Chapter 10, pp. 293-333,  Springer-Verlag, New York, July 2007. 

  9. M. Sabry Hassouna, Aly  A. Farag, and Robert Falk “PDE-Based Three Dimensional Path Planning for Virtual Endoscopy” J. Suri and A. Farag, Editors, Deformable Models I: Biomedical and Clinical Applications, Chapter 13, pp. 445-475,  Springer-Verlag, New York, July 2007. 

  10. H. Abd El Munim, R. Fahmi, N. Youssry El-Zehiry, Aly A. Farag, and M. Casanova, “Volumetric MRI Analysis of Dyslexic Subjects Using Level Set Framework,” J. Suri and A. Farag, Editors, Deformable Models II: Theory & Biomaterial Applications, Chapter 14, pp. 461-492,  Springer-Verlag, New York, July 2007. 

  11. Rachid Fahmi, Ayman El-Baz, Hossam Abd El-Munim, Alaa E. Abdel-Hakim, and Aly A. Farag, “Robust Neuroimaging-Based Classification Techniques for Autistic vs. Typically Developing Brain,” J. Suri and A. Farag, Editors, Deformable Models II: Theory & Biomaterial Applications, Chapter 16, pp. 535-566,  Springer-Verlag, New York, July 2007. 

  12. Aly A. Farag, Sameh Yamany and David Tasman, “System and Method for 3-D Digital Reconstruction of An Oral Cavity from Sequence of 2-D Images, US Patent Application Patent Application No. 09/842,587. 

  13. Sabry Hassouna and Aly A. Farag, “On the Extraction of Curve Skeletons using Gradient Vector Flow,” Proc. of IEEE International Conference on Computer Vision (ICCV'07), Rio de Janeiro, Brazil, October 14-20, 2007, pp. X1-X8. 

  14. Shireen Y. Elhabian, Hossam Abd EL Munim, Salwa Elshazly, Aly A. Farag, and Mohamed Aboelghar, “Experiments On Sensitivity Of Template Matching For Lung Nodule Detection In Lowdose Ct Scans,” Proceedings, 7th IEEE International Symposium on Signal Processing and Information Technology, ISSPIT 2007, Cairo, Egypt , December 15-18, 2007, pp. 1024-1028. 

  15. Asem M. Ali and Aly A. Farag, Graph Cut Based Segmentation Of Multimodal Images,” Proceedings, 7th IEEE International Symposium on Signal Processing and Information Technology, ISSPIT 2007, Cairo, Egypt, December 15-18, 2007, pp. 1047-1052. 

  16. Hossam Abd EL Munim, Aly A. Farag, and Manuel F. Casanova, “Frequency-Domain Analysis of the Human Brain for Studies of Autism,” Proceedings, 7th IEEE International Symposium on Signal Processing and Information Technology, ISSPIT 2007, Cairo, Egypt, December 15-18, 2007, pp. 1198-1203. 

  17. Hossam Abd EL Munim, Aly A. Farag, Mohamed Abo El-Ghar, and Tarek El-Diasty, “A New Shape-Based Segmentation Approach for the DEC-MRI Kidney Images,” Proceedings, 7th IEEE International Symposium on Signal Processing and Information Technology, ISSPIT 2007, Cairo, Egypt, December 15-18, 2007, pp. 1204-1208.

  18. Asem Ali, Aly Farag, Ayman El-Baz, “Graph Cuts Framework for Kidney Segmentation with Prior Shape Constraints,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'07), Sydney, Australia, October 29 – November 2, 2007, pp. 384-392.

  19. Abdelrehim Ahmed, Aly Farag and Thomas Starr, “A New Statistical Model Combining Shape and Spherical Harmonics Illumination for Face Reconstruction,” 3rd International Symposium on Visual Computing (ISVC-07), Lake Tahoe, Nevada/California, November 27-29, 2007, pp. 531-541.

  20. A. Ahmed and A. A. Farag, "Shape from Shading under Various Imaging Conditions," Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR'07), Minneapolis, MN, June 18-23, 2007, pp. X1-X8.

  21. H. Abd El Munim and A. A. Farag, "Shape Representation and Registration using Vector Distance Functions," Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR'07), Minneapolis, MN, June 18-23, 2007, pp. Y1-Y8.

  22. Sergey Chekmenev,  Aly Farag and Edward Essock,  “Thermal imaging of the superficial temporal artery: and arterial pulse recovery model,” Proc. of 3rd IEEE International Workshop on Object Tracking and Classification in and Beyond the Visible Spectrum  (OTCBVS'07), Minneapolis, MN, USA,  June 22, 2007, pp. 1-8. Won Best Paper Award from IEEE.

  23. Dongqing Chen, Aly A. Farag, M. Sabry Hassouna, Robert Falk, Gerald DrydenGeometric Features Based Framework for Colonic Polyp Detection Using A New Color Coding Scheme,” Proc. of IEEE International Conference on Image Processing (ICIP’07), St. Antonio, Texas, September 16-19, 2007, pp. V-17-V-20 .

  24. Abdelrehim Ahmed and Aly A. FaragShape from Shading for Hybrid Surfaces,” Proc. of IEEE International Conference on Image Processing (ICIP’07), St. Antonio, Texas, September 16-19, 2007, pp. II-525-II-528.

  25. Moumen El-Melegy, Ennumeri Zanaty, Walaa Abd-Elhafiez and Aly A. Farag, “On Cluster Validity Indexes in Fuzzy and Hard Clustering Algorithms for Image Segmentation,” Proc. of IEEE International Conference on Image Processing (ICIP’07), St. Antonio, Texas,  September 16-19, 2007, pp. VI-5-VI-8.

  26. Hossam E Abd El Munim and Aly A. Farag,Elastic Registration of the Corpus Callosum,” Proc. of IEEE International Conference on Image Processing (ICIP’07), St. Antonio, Texas, September 16-19, 2007, pp. V-377 – V-380.

  27. Rachid Fahmi and Aly A. FaragA Global-to-Local 2D Shape Registration in Implicit Spaces Using Level Sets,” Proc. of IEEE International Conference on Image Processing (ICIP’07), St. Antonio, Texas, September 16-19, 2007, VI-237-VI-240.

  28. Dongqing Chen, Aly A. Farag, M. Sabry Hassouna, Robert Falk “Principal Curvature Based Colonic Polyp Detection,” Proc. of Computer Assisted Radiology and Surgery (CARS’07), Berlin, Germany, June 27-30, 2007, pp. 6-8.

  29. Rachid Fahmi, Ayman Elbaz, Hossam Hassan, Aly A. Farag and Manuel Casanova, “Structural MRI-Based Discrimination Between Autistic and Typically Developing Brain,” Proc. of Computer Assisted Radiology and Surgery (CARS’07), Berlin, Germany, June 27-30, 2007, pp. 24-26.

  30. Hossam Abd El Munin, Aly A. Farag, Salwa Elshazly and Allan G. Farman, “3D Model of the Human Teeth Using Implicit Vectors Databases,” Proc. of Computer Assisted Radiology and Surgery (CARS’07), Berlin, Germany, June 27-30, 2007, pp. 404-406.

  31. H. E. Abd El Munim and A.A. Farag, “A New Global Registration Approach of Medical Imaging using Vector Maps,” Proceedings of International Symposium on Biomedical Imaging, ISBI’07, April 12-15, 2007 in Metro Washington DC, pp. 584 – 587.

  32. H. E. Abd El Munim and A.A. Farag, “A New Variational Approach for 3D Shape Registration,” Proceedings of International Symposium on Biomedical Imaging, ISBI’07, April 12-15, 2007 in Metro Washington DC, pp. 1324 – 1327.

  33. Asem Ali, A. El-Baz and A.A. Farag, “A Novel Framework for Accurate Lung Segmentation Using Graph Cuts,” Proceedings of International Symposium on Biomedical Imaging, ISBI’07, April 12-15, 2007 in Metro Washington DC, pp. 908 – 911.

  34. Rachid Fahmi, A. El-Baz, Hossam Abd El Munim, Aly A. Farag, and M. Casanova “Classification Techniques for Autistic vs. Typically Developing Brain Using MRI Data,” Proceedings of International Symposium on Biomedical Imaging, ISBI’07, April 12-15, 2007 in Metro Washington DC, pp. 1348 – 1351.

  35. Dongqing Chen, M. Sabry Hassouna, Aly A. Farag and Robert Falk, "A New Color Coding Scheme for Easy Polyp Visualizaion in CT-Based Virtual Colonoscopy," Proceedings of SPIE Symposium on Medical Imaging, San Diego, CA, USA, February 2007.

     2006

  1. Aly A. Farag, Ayman El-Baz, Georgy L. Gimel'farb, “Precise segmentation of multimodal images,” IEEE Transactions on Image Processing  Vol. 15, no. 4, April 2006, pp. 952-968.

  2. M. Sabry. Hassouna, A.A. Farag, S. Hushek, and T. Moriarty, "Cerebrovascular Segmentation from TOF Using Stochastic Models," Medical Image Analysis, Vol.10, no. 1, pp. 2-16, Feb. 2006.

  3. A. E. Abdel-Hakim and A. A. Farag. Colored local invariant features for distinct object description in vision-based intelligent systems. In X. F. Zha, editor, Artificial Intelligence and Integrated Intelligent Information Systems: Emerging Technologies and Applications, chapter 10, pages 178–205. Idea Group Publishing, Hershey, PA, USA, October 2006.

  4. H. E. Abd El Munim and A.A. Farag, ”A Variational Approach for Shapes Registration using Vector Maps,” Proc. of IEEE International Conference on Image Processing (ICIP’06), Atlanta, GA, USA, October 8-11, 2006, pp. 337 - 340.

  5. A. Farag, G. Gimelfarb, A. Elbaz, and A. E. Abdel-Hakim, “Image Alignment Using Learning Prior Appearance Model, Proc. of IEEE International Conference on Image Processing (ICIP’06), Atlanta, GA, 8-11 October 2006, pp. 341-344.

  6. A. El-Baz, A. A. Farag, G. Gimel’farb, M. A. El-Ghar, and T. Eldiasty, “Fast Unsupervised Segmentation of 3D Magnetic Resonance Angiography,” Proc. of IEEE International Conference on Image Processing (ICIP’06), Atlanta, GA, 8-11 October 2006, pp. 93-96.

  7. R. Mohamed, A. Ahmed, A. Eid and A. A. Farag, “Support Vector Machines for Camera Calibration Problem,” Proc. of IEEE International Conference on Image Processing (ICIP'06), Atlanta, GA, USA, October 8-11, 2006, pp. 1029 – 1032.

  8. A. Farag, A. El-Baz, G. L. Gimel'farb, R. Falk, M. Abou El-Ghar, T. Eldiasty, S. Elshazly, “Appearance Models for Robust Segmentation of Pulmonary Nodules in 3D LDCT Chest Images,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark, October 1-6, 2006, pp. 662-670.

  9. A. El-Baz, R. Fahmi, S. Esen Yuksel, A. A. Farag, W. Miller, M. Abou El-Ghar, T. Eldiasty, “A New CAD System for the Evaluation of Kidney Diseases Using DCE-MRI.,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark, October 1-6, 2006, pp. 446-453.

  10. M. Sabry Hassouna, A.A. Farag, and Robert Falk, "Virtual Fly-Over: A New Visualization Technique For Virtual Colonoscopy," Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI’06), Copenhagen, Denmark, October 1-6, 2006, vol. I, pp. 381-388.

  11. A. El-Baz, A. Ali, A. A. Farag, G. L. Gimel'farb, “A Novel Approach for Image Alignment Using a Markov-Gibbs Appearance Model,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark, October 1-6, 2006, pp. 734-741.

  12. A. El-Baz, A. A. Farag, G. L. Gimel'farb, M. Abou El-Ghar, T. Eldiasty, “A New Adaptive Probabilistic Model of Blood Vessels for Segmenting MRA Images,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark, October 1-6, 2006, pp. 799-806.

  13. R. Fahmi, A. Abdel-Hakim Aly, A. El-Baz, and A. Farag, "New Deformable Registration Technique Using Scale Space and Curve Evolution Theory and a Finite Element Based Validation Framework," Proc. of the 28th Annual Int. Conf. of the IEEE Engineering in Medicine and Biology Society, New York, NY, Aug-Sep, 2006, pp. 3041-3044.

  14. A. El-Baz, A. Farag, and G. Gimel’farb, and A. E. Abdel-Hakim, “Robust Image Registration Based on Markov-Gibbs Appearance Model,” Proc. of IEEE International Conference on Pattern Recognition (ICPR’06), Hong Kong, August 20–24, 2006, pp. 1204 - 1207.

  15. A. El-Baz, A. A. Farag, G. L. Gimel'farb, R. Falk, M. Abou El-Ghar, T. Eldiasty, “A Framework for Automatic Segmentation of Lung Nodules from Low Dose Chest CT Scans,” Proc. of IEEE International Conference on Pattern Recognition (ICPR’06), Hong Kong, August 20–24, 2006, pp. 611-614.

  16. A. El-Baz, A. A. Farag, R. Fahmi, S. Esen Yuksel, M. Abou El-Ghar, T. Eldiasty, “Image Analysis of Renal DCE MRI for the Detection of Acute Renal Rejection,” Proc. of IEEE International Conference on Pattern Recognition (ICPR’06), Hong Kong, August 20–24, 2006, pp. 822-825.

  17. A. El-Baz, A. A. Farag, G. L. Gimel'farb, M. Abou El-Ghar, T. Eldiasty, ” Probabilistic Modeling of Blood Vessels for Segmenting MRA Images,” Proc. of IEEE International Conference on Pattern Recognition (ICPR’06), Hong Kong, August 20–24, 2006, pp. 917-920.

  18. A. El-Baz, A. A. Farag, G. L. Gimel'farb, and A. E. Abdel-Hakim, “Experiments on Robust Image Registration Using a Markov-Gibbs Appearance Model,” Joint IAPR International Workshops on  Structural and Syntactic Pattern Recognition (SSPR’06) and  Statistical Techniques in  Pattern Recognition (SPR’06),  Hong Kong, China, August 17-19, 2006, pp. 65-73.

  19. Dongqing Chen, M. Sabry Hassouna, A.A. Farag, and Robert Falk, "An Improved 2D Colonic Polyp Segmentation Framework Based on Gradient Vector Flow Deformable Model," Proc. of International Conference on Medical Imaging and Virtual Reality (MIAR'06), August 20-24, 2006, Shanghai, China, pp. 373-380

  20. M. Sabry Hassouna and A.A. Farag, "Accurate Tracking of Monotonically Advancing Fronts," Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR’06), New York, NY, USA June 17-22, 2006, vol I, pp. 355 - 362.

  21. A. E. Abdel-Hakim and A. A. Farag, “CSIFT: A SIFT Descriptor with Color Invariant Characteristics,” Proc. of IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’06), New York, NY, 17-22 June 2006, pp. 1978-1983.

  22. A. Ahmed and A. A. Farag, "A New Formulation for Shape from Shading for Non-Lambertian Surfaces," Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR'06), New York, NY, USA June 17-22, 2006.

  23. Sergey Chekmenev and Aly Farag, “Multiresolution Approach for Non-Contact Measurements of Arterial Pulse using Thermal Imaging,” Proc. of 3rd IEEE International Workshop on Object Tracking and Classification in and Beyond the Visible Spectrum  (OTCBVS'06), New York, NY, USA,  June 22, 2006.

  24. A. A. Farag, A. El-baz, H. E. Abd El Munim, and S. E. Yuksel, ”Level Set Segmentation using Statistical Shape Priors,” Proc. of IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA’06), New York, NY, USA, June 17-18, 2006, pp. 78-85.

  25. Ayman El-Baz, Aly A. Farag, Asem Ali, Georgy L. Gimel'farb, Manuel Casanova, “A Framework for Unsupervised Segmentation of Multi-modal Medical Images,” Proc. of the Second International Workshop of Computer Vision Approaches to Medical Image Analysis(CVAMIA’06), Graz, Austria, May 2006, pp. 120-131.

  26. N. El-Zehiry, M. Casanova, H. Hassan, and A. A. Farag, ”Effect of Mnincolumnar Disturbance on Dyslexic Brains: An MRI Study,” Proceedings of International Symposuim on Biomedical Imaging, ISBI’06, Arlington, Virginia, April 2006, pp. 1336-1339.

  27. Sergey Y. Chekmenev, Aly A. Farag, and Edward A. Essock, "Multiresolution approach for non-contact measurements of arterial pulse using thermal imaging," IEEE International Workshop on Object Tracking and Classification in and Beyond the Visible Spectrum (OTCBVS’06), 2006.

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     2005

  1. M.T. Ahmed El-Melegy and Aly A. Farag, “Nonmetric Calibration of Camera Lens Distortion: Differential Methods and Robust Estimation,” IEEE Transactions on Image Processing, vol. 43, no. 7, pp. 1215-1230, August 2005.

  2. Aly A. Farag, Refaat M. Mohamed and A. El-Baz, “A Unified Framework for MAP Estimation in Remote Sensing Image Segmentation,” IEEE Transactions on Geosciences and Remote Sensing, vol. 14, no. 8, pp. 1617-1634, July 2005.

  3. A. Eid and Aly A. Farag, “On the Performance Evaluation of 3-D Reconstruction Techniques from a Sequence of Images,” European Journal of Applied Signal Processing (EURASIP), Vol. 13(2005), pp. 1948-1955.

  4. A. El-Baz, Aly A. Farag and Georgy Gimel’farb, “Iterative Approximation of Empirical Grey Level Distributions for Precise Segmentation of Multi-modal Images,”European Journal of Applied Signal Processing (EURASIP), Vol. 13(2005), pp. 1969-1983.

  5. Refaat M. Mohamed, A. El-Baz, and Aly A. Farag, “Probability Density Estimation Using Advanced Support Vector Machines and the Expectation Maximization Algorithm”, International Journal of Signal Processing, vol. 1, pp. 185-188, March, 2005.

  6. A. El-Baz, Refaat M. Mohamed, and Aly A. Farag, “Advanced Support Vector Machines for Image Modeling Using Gibbs-Markov Random Field”, International Journal of Computational Intelligence, vol. 1, pp. 306-309, March, 2005.

  7. Aly A. Farag, A. El-Baz, and Refaat M. Mohamed, “Density estimation using generalized linear model and a linear combination of Gaussians, ” International Journal of Signal Processing, 2005, vol. 1, pp. 76-79, March, 2005.

  8. G. Gimel’farb and Aly A. Farag, “Texture Analysis by Accurate Identification of Simple Markov Models,” Ukrainian Journal of Cybernetics and Systems Analysis, vol. 41, no. 1, pp. 37-49 January 2005.

  9. A. A. Farag, H. Shi, R. Fahmi and M. Voor, “Basic Experiments and Finite Element Analysis of Soft Tissues,” Biomechanics Applied to Computer Assisted Surgery, (Yohan Payan, Ed.), Research Signpost, Kerala, India, Chapter 12, pp. 193-208,  ISBN 81-308-0031-4, 2005.

  10. A. A. Farag, S. M. Yamany, J. Nett, T. Moriarty, A. El-Baz, S. Hushek, and R. Falk, “Medical Image Registration: Theory, Algorithm, and Case Studies in Surgical Simulation, Chest Cancer, and Multiple Sclerosis,” In Handbook of Biomedical Image Analysis, (J. S. Suri, D. L. Wilson, and S. Laxminarayan, Eds.), Kluwer Academic/Plenum Publishers, London, vol. III: Registration Models, pp. 1-42, 2005. ISBN: 0306486075.

  11. A. A. Farag, M. N. Ahmed, A. El-Baz, and H. Hassan, “Advanced Segmentation Techniques,” Handbook of Biomedical Image Analysis, (J. S. Suri, D. L. Wilson, and S. Laxminarayan, Eds.), Kluwer Academic/Plenum Publishers, London, vol I: Segmentation Models, pp. 479-534, 2005. ISBN: 0306485508.
    A. A. Farag, A. El-Baz, and G. Gimel’farb, “Quantitative Nodule Detection in Low Dose Chest CT Scans: New Template Modeling and Evaluation for CAD System Design,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Palm Springs, California, USA, October 26-29, 2005, pp. 720-728.

  12. A. El-Baz, A. A. Farag, G. Gimel’farb, and S. G. Hushek, “Cerebrovascular Segmentation by Accurate Probabilistic Modeling of TOF-MRA Images,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Palm Springs, California, USA, October 26-29, 2005, pp. 34-42.

  13. A. El-Baz, S.E. Yuksel, H. Shi, A. A. Farag, M.A. El-Ghar, T. Eldiasty, and M. A. Ghoneim, “2D and 3D Shape Based Segmentation Using Deformable Models,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Palm Springs, California, USA, October 26-29, 2005, pp. 821-829.

  14. H. Shi, R. Fahmi, and A. A. Farag, “Validation Framework of the F.E. Modeling of Liver Tissue,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), October 26-29, 2005, pp. 531-538.

  15. M. Sabry Hassouna, A. A. Farag, and Robert Falk, “Differential Fly-Throughs (DFT): A General Framework for Computing Flight Paths,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Palm Springs, California, October 26-29, 2005, pp. 654-661.

  16. H. E. Abd El Munim and A. A. Farag, "A Shape-based Segmentation Approach: An Improved Technique using Level Sets," Proc. of International Conference on Computer Vision (ICCV), Beijing, China, October 15-21, 2005, pp. 930-935.

  17. Moumen T. El-Melegy, Nagi H. Al-Ashwal, and Aly A. Farag, “Variational-Based Method to Extract Parametric Shapes from Images,” Proc. of International Conference on Computer Vision (ICCV 05), Beijing, China, October 15-21, 2005, pp. 1786-1791.

  18. M. Sabry Hassouna and A.A. Farag, “Robust Skeletonization Using The Fast Marching Method,” Proc. of IEEE International Conference on Image Processing (ICIP), Genova, Italy, September 11-14, 2005, pp. 437-440.

  19. M. Sabry Hassouna, Alaa Abdel-Hakim, and A. A. Farag, “Robust Robotic Path Planning Using Level Sets,” Proc. of IEEE International Conference on Image Processing (ICIP), Genova, Italy, September 11-14, 2005, pp. 473-476.
    M. Sabry Hassouna and A. A. Farag, “StochasticSegmentation of Blood Vessels from Time-Of-Flight,” Proc. of IEEE International Conference on Image Processing (ICIP), Genova, Italy, September 11-14, 2005, pp. 29-32.

  20. Ahmed Eid and A. A. Farag, “A Silhouette-Contour Based 3-D Registration Methodology As a Pre-Evaluation Step Of 3-D Reconstruction Techniques,” Proc. of IEEE International Conference on Image Processing (ICIP), Genova, Italy, September 11-14, 2005, pp. 505-508.

  21. R. M. Mohamed, A. El-Baz, and A. A. Farag, “Advanced Algorithms For Bayesian Classification In High Dimensional Spaces with Applications in Hyperspectral Image Segmentation,” Proc. of the International Conference on Image Processing (ICIP), Genoa, Italy, Sept. 11-14, 2005, pp. 646-649.

  22. A. El-Baz, A. A. Farag, and G. Gimel’farb, “Stochastic Deformable Model,” Proc. of British Machine Vision (BMVC), Oxford Brookes University, Oxford, UK,September 5-8, 2005, pp. 230-239

  23. R. M. Mohamed, A. El-Baz, and A. A. Farag, “Remote Sensing Image Segmentation Using SVM with Automatic Selection for the Kernel Parameters,” Proc. of the eighth International Conference on Information Fusion (IF), Philadelphia, PA, July 25-29, 2005, pp. 813-820.

  24. A. El-Baz, R. M. Mohamed, and A. A. Farag, “Shape Constraints for Accurate Image Segmentation with Applications in Remote Sensing Data,” Proc. of the eighth International Conference on Information Fusion (IF), Philadelphia, PA, USA , July 25-29, 2005, pp. 645-652.

  25. Alaa E. Abdel-Hakim and A. A. Farag, “Robust Virtual Forces-Based Camera Positioning Using a Fusion of Image Contents and Intrinsic Parameters,” Proc. of International Conference on Information Fusion (IF), Philadelphia, PA, July 25-29, 2005, pp. 540-547.

  26. Alaa E. Abdel-Hakim and A. A. Farag, “Color Segmentation Using an Eigen Color Representation,” Proc. of International Conference on Information Fusion (IF), Philadelphia, PA, July 25-29, 2005, pp. 230-237.

  27. M. Sabry Hassouna and A.A. Farag, “PDE-Based Three Dimensional Path Planning for Virtual Endoscopy,” Proc. of Information Processing in Medical Imaging (IPMI), Glenwood springs, Colorado, USA, July 11-15, 2005, pp. 529-540.

  28. M. Sabry Hassouna and A. A. Farag, “Robust Centerline Extraction Framework Using Level Sets,” Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR), San Diego, CA, USA June 20-26, 2005, pp. 458-465.

  29. A. El-Baz, R. M. Mohamed, A. A. Farag, and G Gimel’farb, “Unsupervised Segmentation of Multi-Modal Images by a Precise Approximation of Individual Modes with Linear Combinations of Discrete Gaussians,Proc. of IEEE International Workshop on Learning in Computer Vision and Pattern Recognition, San Diego, California, June 19-25, 2005, 712-719.

  30. M. Sabry Hassouna and A.A. Farag, “3D Path Planning for Virtual Endoscopy,” Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 22-25, 2005, pp. 115-120.

  31. H. Hassan, A. El-Baz, A. A. Farag, A. Farman, D. Tazman, M. Miller, “A Complete Volumetric 3D Model of the Human Jaw,” Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 22-25, 2005, pp. 1244-1249.

  32. S.E. Yuksel, A. El-Baz, A.A. Farag, M.E.A. El-Ghar, T.A. Eldiasty, and M.A. Ghoneim, “Automatic detection of renal rejection after kidney transplantation,” Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 22-25, 2005, pp. 773-778.

  33. A. El-Baz, S.E. Yuksel, S. Elshazly, and A. A. Farag, “Non-rigid registration techniques for automatic follow-up of lung nodules,” Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 22-25, 2005, pp. 1115-1120.

  34. N. Y. El-Zehiry, M. Casanova, H. Hassan, and A. A. Farag, “Structural MRI Analysis of the Brains of Patients with Dislexia,” Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 22-25, 2005, pp. 1291-1296.

  35. H. Shi, and A. A. Farag, “Validating Linear Elastic and Linear Viscoelastic Models of Lamb Liver Tissue Using Cone-Beam CT,” Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 22-25, 2005, pp. 473-478.

  36. A. El-Baz, A. A. Farag, and G. Gimel'farb, “MGRF Controlled Stochastic Deformable Model,” Proc. of Fourteenth Scandinavian Conference on Image Analysis (SCIA), Joensuu, Finland, June 19-22, 2005, pp. 1138-1147.

  37. A. El-Baz, A. A. Farag, and G. Gimel'farb, “Segmentation of Multi-modal Images by a Precise Approximation of Empirical Distributions with Linear Combinations of Discrete Gaussians,” Proc. of Fourteenth Scandinavian Conference on Image Analysis (SCIA), Joensuu, Finland, June 19-22, 2005, pp. 1128-1137. 

  38. M. Sabry Hassouna, Alaa E. Abdel-Hakim, and A. A. Farag, “PDE-Based Robust Robotic Navigation,” Proc. of Second Canadian Conference on Computer and Robot Vision (CRV), British Columbia, Canada, May 9-11, 2005, pp. 176- 183.

  39. A. A. Farag and Alaa E. Abdel-Hakim, “Virtual Forces for Camera Planning in Smart Vision Systems,” Proc. of IEEE Workshop on Applications of Computer Vision (WACV), Breckenridge CO,  5-7 January, 2005, pp. 269-274.

  40. Alaa E. Abdel-Hakim and Aly A. Farag, “Colored Local Invariant Features for Object Description,” The first international conference on graphics, vision, and image processing (GVIP), Cairo, Egypt, 19-21 December, 2005, pp. 100-106.

  41. S. Yu. Chekmenev, H. Rara, and Aly A. Farag, “Non-contact, Wavelet-based Measurement of Vital Signs using Thermal Imaging,” The first international conference on graphics, vision, and image processing (GVIP), Cairo, Egypt, 19-21 December, 2005, pp. 107-112 .

  42. Dongqing Chen, Aly A. Farag, “Detecting Critical Points of Skeletons Using Triangle Decomposition of Gradient Vector Flow Field,” The first international conference on graphics, vision, and image processing (GVIP), Cairo, Egypt, 19 21 December, 2005, pp. 113-118.

  43. Hossam Abd El Munim, ”Efficient Shape-based Segmentation using level Sets,” International Conference on Graphics, Vision and Image Processing (GVIP-05), Cairo, Egypt 19-21 December 2005.

  44. Sergey Y. Chekmenev, Ham Rara, and Aly A. Farag, "Non-contact, wavelet-bases measurement of vital signs using thermal imaging," International Journal on Graphics, Vision and Image Processing  (GVIP’05), 2005.

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     2004

  1. A.A. Farag, H. Hassan, R. Falk, and S.G. Hushek, “3D Volume Segmentation of MRA Data Sets Using Level Sets,” Academic Journal of Radiology, pp. 419-435, April, 2004.

  2. A.A. Farag, A. El-Baz, G.Gimelfarb, R Falk, and S.G. Hushek, “Automatic detection and recognition of lung abnormalities in helical CT images using deformable templates,” Lecture Notes in Computer Science, vol. 3217, pp. 131-139, September, 2004. (Also appeared in the Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI-2004, September 26-29 2004, pp. 856-864).

  3. A. Eid and A.A. Farag, “Design of an experimental setup for performance evaluation of 3-D reconstruction techniques from sequence of images,” Proc. of Eighth European Conference on Computer Vision (ECCV'04), Workshop on Applications of Computer Vision, Prague, Czech Republic, May 11-14, 2004, pp. 69-77.

  4. A.A. Farag, M. Sabry Hassouna and A. El-Baz, “Real Time Vision-Based Image Guided Neurosurgery,” Proc. of Computer Assisted Radiology and Surgery, Chicago, IL, June 23-26, 2004, pp. 467-472.

  5. H. Hassan and A.A. Farag, “Shape Based MRI Data Segmentation in Presence of Intensity In-homogeneities Using Level Sets,” Proc. of Computer Assisted Radiology and Surgery, Chicago, June 23-26, 2004, pp. 213-218.

  6. H. Shi and A.A. Farag, “Intensity and Region-of-Interest Based Finite Element Modeling of Brain Deformation,” Proc. of Computer Assisted Radiology and Surgery, Chicago, June 23-26, 2004, pp. 373-377.

  7. R. M. Mohamed and A.A. Farag, “Mean Field Theory for Density Estimation Using Support Vector Machines,” Proc. of Seventh International Conference on Information Fusion (Fusion-04), Stockholm, Sweden, June 28 - July 1, 2004, pp. 495-501.

  8. A. Eid and A.A. Farag, “On the fusion of 3-D reconstruction techniques,” Proc. of Seventh International Conference on Information Fusion (Fusion-04), Stockholm, Sweden, June 28-July 1, 2004, pp. 856-861.

  9. A. Eid and A.A. Farag, “A unified framework for performance evaluation of 3-D reconstruction techniques,” Proc. of IEEE Conference on Computer Vision and Pattern Recognition (CVPR'04), Workshop on Real-time 3-D Sensors and their Use, Washington, DC, June 27-July 2, 2004, pp. 41-48.

  10. A.A. Farag, A. El-Baz and G. Gimel'farb, “Precise image segmentation by iterative EM-based approximation of empirical gray level distribution with linear combination of Gaussians,” Proc. of IEEE International Workshop on Learning in Computer Vision and Pattern Recognition, Washington, D.C., June 27-July 2 2004, pp. 121-129.

  11. G. Gimel’farb, A.A. Farag and A. El-Baz, “Expectation-Maximization for a linear combination of Gaussians,” Proc. of IAPR International Conference on Pattern Recognition, ICPR-2004, Cambridge, UK, 23–26, August 2004, pp. 422–425.

  12. A.A. Farag, A. El-Baz and G. Gimel’farb, “Detection and recognition of lung abnormalities using deformable templates,” Proc. of ICPR International Conference on Pattern Recognition, ICPR-2004, Cambridge, UK, August 23-26, 2004, pp. 738-741.

  13. A.A. Farag and Alaa E. Abdel-Hakim, “Detection, Categorization and Recognition of Road Signs for Autonomous Navigation,” Proc. of Advanced Concepts in Intelligent Vision Systems (ACIVS’2004), Brussel, Belgium, August 31-September 3, 2004, pp. 125-130.

  14. A.A. Farag and A. Eid, “Local quality assessment of 3-D reconstructions from sequence of images: a quantitative approach,” Proc. of Advanced Concepts for Intelligent Vision Systems (ACIVS'04), Brussels, Belgium, August 31-September 3, 2004, pp. 161-168.

  15. A.A. Farag and Alaa E. Abdel-Hakim, “Scale Invariant Features for Camera Planning in a Mobile Trinocular Active Vision System,” Proc. of Advanced Concepts in Intelligent Vision Systems (ACIVS’2004), Brussel, Belgium, August 31-September 3 2004, pp. 169-176.

  16. A.A. Farag and H. Hassan, “Adaptive Segmentation of Multi-modal 3D Data Using Robust Level Set Techniques,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Saint Malo, France, September 26-29, 2004, pp. 143-150.

  17. A.A. Farag, A. El-Baz, G.Gimelfarb, R. Falk and S. G. Hushek, “Automatic detection and recognition of lung abnormalities in helical CT images using deformable templates,” Proc. of International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI-2004, September 26-29, 2004, pp. 856-864.

  18. A.A. Farag, A. El-Baz and G. Gimel’farb, “Detection and recognition of lung nodules in spiral CT images using Deformable templates and bayesian post-classification,” Proc. of IEEE International Conference on Image Processing, ICIP-2004, Singapore, October 24-27, 2004, Vol. I, pp. 151-154.

  19. A.A. Farag, A. El-Baz, and G. Gimel’farb “Density Estimation Using Modified Expectation Maximization for a linear combination of Gaussians,” Proc. of IEEE International Conference on Image Processing (ICIP- 2004), Singapore, October 24-27 2004, Vol. I, pp. 194-197.

  20. A.A. Farag and Alaa E. Abdel-Hakim, “Image Content-Based Active Sensor Planning for a Mobile Trinocular Active Vision System,” Proc. of IEEE International Conference on Image Processing (ICIP’2004), Singapore, October 24-27, 2004, Vol. II, pp. 193-196.

  21. S. Mahmoud, M. El-Melegy, S. and A.A. Farag, “A Comparative Study of Statistical and Neural Methods for Remote Sensing Image Classification and Decision Fusion,” Proc. of IEEE International Conference on Image Processing, ICIP-2004, Singapore, October 24-27, 2004, Vol. II, pp. 211-214.

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     2003

  1. M. P. Eklund, A. A. Farag, and M.T. El-Melegy, "Robust Correspondence Methods for Stereo Vision," International Journal of Pattern Recognition and Artificial Intelligence, vol. 17, no. 7, pp. 1059-1079, 2003.

  2. A. A. Farag and A. Eid, “Video Reconstructions in Dentistry,” Orthodontic Craniofacial Res 6 (Suppl. 1),   pp. 108–116, 2003.

  3. M.S. Hassouna, A. A. Farag, S. Hushek, and T. Moriarty, “Statistical-Based Approach for Extracting 3D Blood Vessels from TOF-MRA Data,” International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI-03, Montréal, Canada, November 15-18, 2003, pp. 680-687.

  4. M. T. El-Melegy and A. A. Farag, “Nonmetric Lens Distortion Calibration: Closed-form Solutions, Robust Estimation and Model Selection,” International Conference of Computer Vision, ICCV-04, place, October 13-16, 2003, pp. 554-559.

  5. A. El-Baz, and A. A. Farag, “Stochastic Models in Image Analysis: Parameter Estimations and Case Studies in Image Segmentation,” IEEE Workshop on Statistical Signal Processing, September 28 – October 1, 2003, pp. 154-157.

  6. H. Hassan and A. A. Farag, “MRA Data Segmentation Using Level Sets,” IEEE International Conference on Image Processing, ICIP-03, Barcelona, Spain, September 14-17, 2003, pp. II 173-176.

  7. A. El-Baz and A. A. Farag, “Image Segmentation Using GMRF Models: Parameters Estimation and Applications,” IEEE International Conference on Image Processing, ICIP-03, Barcelona, Spain, September 14-17, 2003, pp. II 177-180.

  8. R.M. Mohamed and A. A. Farag, “Parameter Estimation for Bayesian Classification of Multispectral Data,” Seventh International Conference on Knowledge-Based Intelligent Information & Engineering Systems, University of Oxford, United Kingdom, September 4-5, 2003, pp. 346-355.

  9. A. Eid and A. A. Farag, “On The Performance Characterization of Stereo and Space Carving,” Advanced Concepts for Intelligent Vision Systems Conference, Ghent, Belgium, September 2-5, 2003, pp. 291-296.

  10. A. El-Baz and A. A. Farag, “Parameter Estimation in Gibbs-Markov Image Models,” International Conference on Information Fusion, Queensland, Australia, July 8-11, 2003, pp. 934-942.

  11. R. M. Mohamed and A. A. Farag, “A New Unsupervised Approach for the Classification of Multispectral Data,” Sixth International Conference on Information Fusion, Fusion-03, Queensland, Australia, July 8-11, 2003, pp. 951-958.

  12. H. Hassan and A. A. Farag, “Cerebrovascular Segmentation for MRA Data Using Level Sets,” Computer Assisted Radiology and Surgery, CARS-03, London, England, June 25-28, 2003, pp. 246-252.

  13. A. El-Baz, A. A. Farag, R. Falk, and R. La Rocca, “A Unified Approach for Detection, Visualization, and Identification of Lung Abnormalities in Chest Spiral CT Scans,” Computer Assisted Radiology and Surgery, CARS-03, London, June, 25-28, 2003, pp. 998-1004.

  14. R.M. Mohamed and A. A. Farag, “Two Sequential Stages Classifier for Multispectral Data,” International Conference on Computer Vision and Pattern Recognition, CVPR-03, Workshop on Intelligent Learning, Madison, Wisconsin, June 16-22, 2003, pp. 110-116.

  15. M. T. El-Melegy and A. A. Farag, “Statistically Robust Approach to Lens Distortion Calibration with Model Selection,” International Conference on Computer Vision and Pattern Recognition, CVPR-03, Workshop on Intelligent Learning, Madison, Wisconsin, June 16-22, 2003, pp. 150-156.

  16. A. El-Baz, A. A. Farag, R. Falk, and R. La Rocca, “Automatic Identification of Lung Abnormalities in Chest Spiral CT Scans,” International Conference on Acoustics, Speech, and Signal Processing, ICASSP-03, April 6-10, 2003, pp. 261-264.

  17. R.M. Mohamed and A. A. Farag, “Classification of Multispectral Data Using Support Vector Machines Approach for Density Estimation,” International Conference on Intelligent Engineering System, Assiut, Egypt, March 4-6, 2003, pp. 102-109.

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     2002

  1. S. M. Yamany and A. A. Farag, “Surface Signatures: An Orientation Independent Free-Form Surface Representation Scheme for the Purpose of Objects Registration and Matching IEEE Transactions on Pattern Analysis and Machine Intelligence – Vol. 24, No 8, August 2002.

  2. M. T. Ahmed and A. A. Farag, "A neural network approach for solving the problem of camera calibration,"' Imaging, Vision and Computing – Vol. 20, No. 9-10, August 2002.

  3. M. N. Ahmed, S. Yamany, N. Mohamed, A. A. Farag, and T. Moriarty  “A Modified Fuzzy C-Means Algorithms for Bias Field Estimation and Segmentation of MR Date”, IEEE Transactions on Medical Imaging, Vol. 21, No. 3, pp. 193-199, March 2002.

  4. Aly A. Farag, Refaat M. Mohamed and Hani Mahdi, “Experiments in Image Classification and Data
    Fusion
    ,”Proceedings of 5th International Conference on Information Fusion, Annapolis, MD, Vol. 1, pp. 299-308, July 2002.

  5. Mohamed Sabry, Charles B. Sites, Aly A. Farag, Stephen Hushek, and Thomas Moriarty “A Fast Automatic Method for 3D Volume Segmentation of the Human Cerebrovascular,” Proc. of the 13th International Conf. on Computer Assisted Radiology and Surgery, (CARS'02), Paris, France, pp. 382-387, 26-29 June, 2002.

  6. Ahmed Eid, Sherif Rashad and Aly A. Farag, "A General Purpose Platform for 3D Reconstruction from 
    Sequence of Images
    ", Proceedings of 5th International Conference on Information Fusion, Annapolis, MD, Vol. 1, pp. 425-413, July 2002.

  7. Hani Mahdi and Aly A. Farag, “Image Registration in Multispectral Data Sets,” IEEE International Conference on Image Processing (ICIP’2002), Rochester, New York, pp. 369-372, September 22-25, 2002.

  8. Ahmed Eid, Sherif Rashad and Aly Farag, “Validation of 3D Reconstruction from Sequence of Images,” Proceedings of the International Conference on Signal Processing, Pattern Recognition, and Applications SSPRA 2002, Crete, Greece, June 2002.

  9. Mohamed Sabry, Charles B. Sites, Aly A. Farag, Stephen Hushek, and Thomas Moriarty “Statistical Cerebrovascular Segmentation for Phase-Contrast MRA Data,” Proc. of the International Conf. on Biomedical Engineering, Cairo, Egypt, December, 2002.  

  10. Aly A. Farag, Emir Dizdarevic, Ahmed Eid, and Allbert Lörincz, "Monocular, Vision Based, Autonomous Refueling System," Proceedings Sixth IEEE Workshop on Application of Computer Vision (WACV 2002), 3-4 December, Orlando, FL, sponsored by IEEE Computer Society, pages 309-313.

  11. Ayman El-Baz, Aly A. Farag, Robert Falk,  and Renato La Rocca, "Detection, Visualization, And Identification Of Lung Abnormalities In Chest Spiral Ct Scans: Phase I,", Proc. of the International Conf. on Biomedical Engineering, Cairo, Egypt, December, 2002.  

  12. Aly A. Farag and Charles B. Sites, "Virtual Endoscopy: Modeling the Navigation in 3D Brain Volumes," Proc. of the International Conf. on Biomedical Engineering, Cairo, Egypt, December, 2002.  

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     2001

  1. E. E. Hemayed, M.T. Ahmed and A. A. Farag, “CardEye Active Vision System,” Lecture Notes in Computer Science, Bernt Schiele, Ed., Springer-Verlag, Berlin, pp. 155-173, 2001.

  2. M. T. Ahmed and A. A.  Farag,  ''Differential Methods for Non-metric Calibration of Camera Lens Distortion,'' IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’2001), Hawaii, Vol. 2, pp. 477-482, December 2001.

  3. M. T. Ahmed and A. A.  Farag,   ''Locked, Unlocked and Semi-locked Network Weights for Four Different Camera Calibration Problems,’’ INNS-IEEE International Joint Conference on Neural Networks (IJCNN'2001), Washington D.C., July 2001.

  4. M. T. Ahmed, A. Eid and A. A.  Farag ''Human Jaw Reconstruction: New Approach and Improvements,’’ International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01), The Netherlands, Oct. 2001.

  5. M. T. Ahmed and A. A. Farag, “Non-metric Calibration of Camera Lens Distortion,” IEEE International Conference on Image Processing (ICIP'2001), Greece, Vol. II, pp. 157-160, October 2001.

  6. M. T. Ahmed, A. Eid, and A. A.. Farag, “3-D reconstruction of the Human Jaw Using Space Carving,” IEEE International Conference on Image Processing (ICIP'2001), Greece, Vol. II,  pp. 323-326, October 2001.

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     2000

  1. S. M. Yamany, A. A. Farag, D. Tasman and A. G. Farman,  “A 3-D Reconstruction System for the Human Jaw Using a Sequence of Optical Images,” IEEE Transactions on Medical Imaging, Vol. 19 (5), pp. 538-547, May 2000.

  2. A. Eldeib, S. Yamany and Aly Farag, "Volume Registration by Surface Point Signature and Mutual Information Maximization with Applications in Intra-Operative MRI Surgeries," IEEE International Conference on Image Processing (ICIP'2000), Vancouver, BC, Canada, Vol. 1, pp. 200-203, October 2000.

  3. E. Hemayed and A. Farag, "Object Modeling Using Space Carving," IEEE International Conference on Image Processing (ICIP'2000), Vancouver, BC, Canada, Vol. 2, pp. 760-763, October 2000.

  4. M. Mostafa; T. Perkins and A. Farag, "Supervised Fuzzy and Bayesian Classification of High Dimensional Data," IEEE International Conference on Image Processing (ICIP'2000), Vancouver, BC, Canada, Vol. 1, pp. 772-775, October 2000.

  5. S. Yamany and A. Farag, "Coding of 3D Objects Using Surface Signatures," IEEE International Conference on Image Processing (ICIP'2000), Vancouver, BC, Canada, Vol. 3, pp. 628-631-763, October 2000.

  6. M. G-H Mostafa, T. Perkins and A. Farag, "A Two-Step Fuzzy-Bayesian Classification for High Dimensional Data", Proc. International Conference on Pattern Recognition (ICPR'2000), Barcelona, Spain, volume 3, pages 421-424, September 2000.

  7. S. Yamany and A. Farag, "3D Objects Coding and Recognition using Surface Signatures", Proc. International Conference on Pattern Recognition (ICPR'2000), Barcelona, Spain, volume 4, pages 571-574, September 2000.

  8. M. T.  Ahmed and Aly Farag, "Zoom-lens Camera Calibration from Noisy Data with Outliers," Proc. 11th British Machine Vision Conference (BMVC'2000), Bristol, UK, volume 2, pages 636-645, September 2000.

  9. M. G-H. Mostafa, A. A. Farag and E. A. Essock, “Multimodality Image registration and Fusion using Neural Network,” Fusion2000, Paris, France, Vol. 2, pages WeD3-3 -- WeD3-9, July 2000.

  10. M. T. Ahmed and A. A. Farag, “A Neural Optimization Framework for Zoom Lens Camera Calibration,” IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’2000), Hilton Head, South Carolina,  pp. 403-409, June 2000.

  11. Elsayed Hemayed, Moumen Ahmed and Aly Farag, "CardEye: A 3D Trinocular Active Vision System,” Proc. 3rd IEEE Conference on Intelligent Transportation Systems (ITSC'2000), Dearborn, Michigan, pages: 398 -403, October 2000.

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     1999

  1. M. G. Mostafa, E. Hemayed, and A. A. Farag, “Target recognition via 3D Object Reconstruction From Image Sequence and Contour Matching,” Pattern Recognition Letters, Vol.  20 (11-13), pp. 1381-1387, November 1999.

  2. S. M. Yamany, A. A. Farag, and S. Hsu, “Fuzzy Hyperspectral Classifier for Automatic Target Recognition (ATR) Systems,Pattern Recognition Letters,  Vol. 20 (11-13), pp. 1431-1438, November 1999.  

  3. W. D. Ehringer, S.M. Yamany, K. Steier, A. A. Farag, F. J. Roisen, A. Dozier and F. N. Miller, “Quantitative Image Analysis Of F­Actin in Endothelial Cells,”  Microcirculation, Vol. 6, pp. 291-303, 1999.

  4. S. M. Yamany, M. N. Ahmed and A. A. Farag, “A new genetic-based technique for matching 3D curves and surfaces, Pattern Recognition, Vol. 32 (10), pp. 1817-1820, October 1999.

  5. M. N. Ahmed, S. M. Yamany, and A. A. Farag. “Function Approximation using Neural Networks.” Wiley Encyclopedia of Electrical and Electronic Engineering, Vol. 8, pp37-45, John G. Webster Ed., John WILEY & Sons Inc., NY, 1999.

  6. M. T. Ahmed, E. E. Hemayed and A. A. Farag, “Neurocalibration: a neural network that can tell camera calibration parameters,” IEEE International Conference on Computer Vision (ICCV’99), Kerkyra, Greece, pp. 463-468, September 1999.

  7. S. M. Yamany and A. A. Farag, “Free-Form Surface Registration using Surface Signatures,” IEEE International Conference on Computer Vision (ICCV’99), Kerkyra, Greece, pp. 1098-1104, September 1999.

  8. A. Eldeib, S. M. Yamany and A. A. Farag, “Multi-modal Medical Volumes Fusion by Surface Matching,” International Conference on Medical Image Computing and Computer-Assisted Intervention  (MICCAI’99), Cambridge, England, pp. 672-679, September 1999.

  9. M. N. Ahmed, S. M. Yamany, N. A. Mohamed, and A. A. Farag, “A Modified Fuzzy C-Means Algorithm for MRI Bias-Field Estimation and Adaptive Segmentation, International Conference on Medical Image Computing and Computer-Assisted Intervention  (MICCAI’99), Cambridge, England, pp. 72-81, September 1999.

  10. S. M. Yamany, A. A. Farag, A. Farman and D. Tasman, “Robust 3-D Reconstruction of the Human Jaw from Video Images,” International Conference on Medical Image Computing and Computer-Assisted Intervention  (MICCAI’99), Cambridge, England, pp. 778-787, September 1999.

  11. M. G. Mostafa, Sameh M. Yamany and Aly A. Farag, “Integrating Shape From Shading and Range Data,” IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’99), Fort Collins, Colorado,  pp. 15-20, June 1999.

  12. Peter Lehel, Elsayed E. Hemayed, Aly A. Farag, ``Sensor Planning for a Trinocular Active Vision System,'' IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’99), Fort Collins, Colorado,  pp. 306-312, June 1999.

  13. M. N. Ahmed, S. M. Yamany, A. A. Farag and Thomas Moriarty, “Bias Field Estimation and Adaptive Segmentation of MRI Data Using a Modified Fuzzy C-Means Algorithm,IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’99),  Fort Collins, Colorado,  pp. 250-255, June 1999.

  14. S. M. Yamany, A. M. El-Bialy and A. A. Farag, “Object Recognition Using Neural Networks and Surface Signatures,” IEEE International Joint Conference on Neural Networks (IJCNN’99), Washington DC, July 1999, Vol. 5, pp. 3188-3193.

  15. E. Hemayed, M. Brown, A. A. Farag and B. Seales, ``Cooperative Stereo: Combining Edge­ and Area­Based Stereo,'' Proceedings of the IEEE Aerospace Applications Conference, Vol. 3, pp. 421-428, March 1999.

  16. M. G. Mostafa, S. M. Yamany and Aly A. Farag, ``Integrating Stereo and Shape from Shading,'' IEEE International Conference on Image Processing (ICIP'99), Kobe, Japan, Vol. 3, pp. 130-134, October, 1999.

  17. M. T. Ahmed, E. E. Hemayed and A. A. Farag, ``A Neural Approach for Single­ and Multi­Image Camera Calibration,'' IEEE International Conference on Image Processing (ICIP'99), Kobe, Japan, Vol. 3, pp. 925-929, October, 1999.

  18. D. L. Guidry and A. A. Farag, ``Using Active Contours and Fourier Descriptors for Motion Tracking with Applications in MRI,'' IEEE International Conference on Image Processing  (ICIP'99), Kobe, Japan, Vol. 2, pp. 177-181, October, 1999.

  19. Sameh M. Yamany, Aly A. Farag and Ahmed M. El­Bialy. ``Free­Form Object Recognition and Registration Using Surface Signatures,'' IEEE International Conference on Image Processing (ICIP'99), Kobe, Japan, Vol. 2, pp. 475-461, October, 1999.

  20. N. A. Mohamed, M. N. Ahmed and A. A. Farag, ``Modified fuzzy C­mean in medical image segmentation,'' Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'99), Vol. 6, pp. 3429 ­ 3432, March 1999.

  21. D. L. Guidry and A. A. Farag, ``Active contours: an overview with applications to motion artifact cancellation in MRI,'' Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'99), Vol. 6, pp. 3425­3428, March 1999.

  22. A. A. Farag, A. G. Farman, D. Tasman, and S. M. Yamany, ``A computer vision system for modeling dental occlusions,'' Proc. of the 13th International Conf. on Computer Assisted Radiology and Surgery, (CARS'99), pp. 932­936, Paris 1999.

  23.   S. M. Yamany, E. Rickard, A. A. Farag and D. Tasman, ``Orthodontic measurements and treatment planning using computer vision,'' Proc. of the 13th International Conf. on Computer Assisted Radiology and Surgery, (CARS'99), pp. 937­941, Paris 1999.

  24.   A. Eldeib, A. A. Farag, and T. Moriarty, ``A fast genetic search algorithm for accurate multi­modal volume registration by maximization of mutual information,'' Proc of the 13th International Conf. on Computer Assisted Radiology and Surgery (CARS'99), pp. 244­248, Paris 1999.

  25. M. N. Ahmed, S.M. Yamany, N. A. Mohamed, A. A. Farag and T. Moriarty, ``Bias field estimation and adaptive segmentation of MRI data using a modified fuzzy C­means algorithm,'' Proc. of the 13th International Conf. on Computer Assisted Radiology and Surgery, (CARS'99), pp. 1004, Paris 1999.

  26. M. G. Mostafa, S. M. Yamany and A. A. Farag, ``Efficient 3D data fusion for object reconstruction using neural networks,'' Proceedings of SPIE, vol. 3647, p. 80­89, Applications of Artificial Neural Networks in Image Processing IV; Nasser M. Nasrabadi, Aggelos K. Katsaggelos: Eds, March 1999.

  27. Larson, P., Mohamed, A., Eldeib, A., Mohamed, A., Yamany, S., Sites, C., Vitaz, T., Farag, A., Shields, C., and Moriarty, T, “Image-guided Navigation for Neuroendoscope,” the 49th Annual Meeting of the Congress of Neurological Surgeons – CNS’99, Oct. 30 – Nov. 4, Boston, MA, USA, 1999.

  28. Larson, P., Eldeib, A., Mohamed, A., Sites, C., Farag, A., Shields, C., and Moriarty, T, “Image Processing Paradigms for Image-Guided Neurosurgical Navigation,” the 49th Annual Meeting of the Congress of Neurological Surgeons – CNS’99, Oct. 30 – Nov. 4, Boston, MA, USA, 1999.

  29. Mohamed, A., Larson, P., Eldeib, A., Sites, C., Farag, A., and Moriarty, T, “Rapid Registration for Image Guided Neurosurgery,” the 5th International Workshop – Computer Assisted Surgery – CAS’99 and Rapid Prototyping in Medicine, Oct. 14 – 16, Erlangen, Germany 1999.

  30. Sites, C., Larson, P., Mohamed, A., Eldeib, A., Farag, A., and Moriarty, T, “3-D Modeling of the cerebral Vasculature,” the 5th International Workshop – Computer Assisted Surgery – CAS’99 and Rapid Prototyping in Medicine, Oct. 14 – 16, Erlangen, Germany 1999.

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     1998

  1. E. E. Hemayed and A. A. Farag, ``Integrating Edge­based Stereo and Structured Light for Robust Surface Reconstruction,'' IEEE International Conference on Intelligent Vehicles (IV­ 98), Stuttgart, Germany,  pp. 611-616, Oct. 1998.

  2. S.M. Yamany, M. N. Ahmed, and A. A. Farag, ``Novel Surface Registration Using the Grid Closest Point (GCP) Transform,'' IEEE International Conference on Image Processing (ICIP'99), Vol. 3, pp. 809­813, Chicago 1998.

  3. N. A. Mohamed, M. N. Ahmed and A. A. Farag, ``Modified Fuzzy C­Mean in Medical Image Segmentation,'' Proc. IEEE Int. Conf. on Engineering Medicine and Biological Sciences (EMBS'98), vol. 20, part 3, pp. 1377­1380, 1998.

  4. D. L. Guidry and A. A. Farag, ``Active Contours: An Overview with Applications to Motion Artifact Cancellation in MRI,'' Proc. IEEE Int. Conf. Engineering Medicine and Biological Sciences (EMBS'98), vol. 20, part 2, pp. 644­647, 1998.

  5. S. M. Yamany, Aly A. Farag, ``A System for Human Jaw Modeling Using Intra­Oral Images,'' Proc. of IEEE Int. Conf. Engineering Medicine and Biological Sciences (EMBS'98), vol. 20, part 2, pp. 563­566, 1998.

  6. S. M. Yamany, Aly A. Farag, Nevin A. Mohamed, ``Orthodontics Measurements using Computer Vision,'' Proc. IEEE Int. Conf. Engineering Medicine and Biological Sciences (EMBS'98), vol. 20, part 2, pp. 536­569, 1998.

  7. E. E. Hemayed and A. A. Farag, ``A Geometrical­Based Trinocular Vision System for Edges Reconstruction,'' IEEE International Conference on Image Processing (ICIP'98), Chicago, IL, Vol. 2, pp. 162 ­ 166 Oct. 1998.

  8. A. M. Eldeib, M. N. Ahmed, A. A. Farag and C. B. Sites, ``A Web­based System for Surgical Planning and Simulation,'' Proc of SPIE, vol. 3517, pp. 273­283, Nov 1998.

  9. M. G. Mostafa, S. M. Yamany and Aly A. Farag, ``Data fusion for 3D object reconstruction,'' Proceedings of SPIE, vol. 3523, p.88­99, Sensor Fusion and Decentralized Control in Robotic Systems, Paul S. Schenker; Gerard T. McKee; Eds., Oct 1998.

  10. H. M. Hamdan, E. E. Hemayed and A. A. Farag, ``A Fast 3­D Object Reconstruction Using Trinocular Vision and Structured Light,'' Proc. of SPIE, Vol. 3522, Intelligent Robots and Computer Vision XVII: Algorithms, Techniques, and Active Vision, Boston, Massachusetts, Nov. 1998.

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     1997

  1. M. N. Ahmed and A. A. Farag, “Two-stage Neural Network for Volume Segmentation of Medical Images,” Pattern Recognition Letters, Vol. 18, No 11-13, pp. 1143-1151, November 1997.

  2. S. M. Yamany, K. Khiani, A. A. Farag, “Application of Neural Networks and Genetic Algorithms in the Classification of Endothelial Cells,Pattern Recognition Letters, Vol. 18, no 11-13, pp. 1205-1210, November 1997.

  3. M. N. Ahmed, S. M. Yamany, E. E. Hemayed, and A. A. Farag, ``3D Reconstruction of the Human Jaw from a Sequence of Images,'' IEEE International Conference on Computer Vision and Pattern Recognition (CVPR’97), Puerto Rico,  pp. 646­653, June 1997.

  4. M. N. Ahmed and A. A. Farag, “Two­stage Neural Network for Medical Volume Segmentation,” IEEE International Conference on Neural Networks (ICNN97), pp. 60­66, Houston, TX, June 1997.

  5. M. N. Ahmed, S. M. Yamany, and A. A. Farag, ``Fast Algorithm for Registration of Free­Form Curves and Surfaces,'' IEEE International Conference on Image Processing (ICIP97), Santa Barbara, CA, Oct. 1997.

  6. M. N. Ahmed, S. M. Yamany, and A. A. Farag, ``Recovery of the human jaw from a sequence of images,'' Proc of International Conf. Image Processing (ICIP97), Santa Barbara, CA, Oct. 1997.

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     1996

  1. Y. M. Kadah, A. A. Farag, J. M. Zurada, A. Badawi and A. Youssef, “Classification Algorithms for Quantitative Tissue Characterization of Diffuse Liver Disease from Ultrasound Images,” IEEE Transactions on Medical Imaging Vol. 15, No. 4, pp. 466-478, August 1996.

  2. M. N. Ahmed, E. E. Hemayed, E. D. Jansing, and A. A. Farag, ``Surface reconstruction from serial cross­sections,'' Proceedings from the IEEE Aerospace Applications conference, Colorado, Feb. 1996.

  3. M. N. Ahmed and Aly A. Farag, ``3D segmentation and labeling of CT brain images using unsupervised clustering,'' Proceedings of the ANNIE­96, Artificial Neural Networks in Engineering, Rolla, Missouri, November 1996. Appeared in C. H. Dagli, et al., Eds, Intelligent Engineering Systems Through Artificial Neural Networks, Vol. 6, pp. 450­456, ASME Press, New York, 1996.

  4. M. N. Ahmed and A. A. Farag, ``3D segmentation and labeling of CT brain images using self organizing Kohonen network to quantify TBI recovery,'' Proceedings from the IEEE Engineering in Medicine and Biology Society (EMBS) conference, Amsterdam, Oct. 1996.

  5. K. J. Khiani, S. M. Yamany and A. A. Farag, ``Classification of the Effects of F­actin Under Treatment of Drugs in Endothelial Cells,'' Proceedings of the ANNIE­96, Artificial Neural Networks in Engineering, Rolla, Missouri, November 1996. Appeared in C. H. Dagli, et al., Eds, Intelligent Engineering Systems Through Artificial Neural Networks, Vol. 6, pp. 320­326, ASME Press, New York, 1996.

  6. K. J. Khiani, S. M. Yamany and A. A. Farag, "2­Parametric and non­parametric techniques for identifying images of F­ACTIN distribution in Endothelial cells with applied agonists", Proceedings from the IEEE Engineering in Medicine and Biology Society (EMBS) conference, Amsterdam, Oct. 1996.

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     1995

  1. A. A. Farag and E. J. Delp, “Edge Linking by Sequential Search,” Pattern Recognition. Vol. 24, No. 5, pp. 611-633, 1995.

  2. S. A. Wilson and A. A. Farag, Image Compression Using Neural Networks, Proceedings of the ANNIE­95, Artificial neural Networks in Engineering, Rolla, Missouri, November 1995. Appeared in C. H. Dagli, et al., Eds, Intelligent Engineering Systems Through Artificial Neural Networks, Vol. 5, pp. 503­508, ASME Press, New York, 1995.

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     1994

  1. 1.       A. A. Farag, W. A. Tacker, K. S. Foster, J. D. Bourland, and L. A. Geddes, ``Detection of Pulse and Respiration Signals from the Wrist Using Dry Electrodes,'' Biomedical Instrumentation & Technology, pp. 311­314, 1994.

  2. M. N. Ahmed and A. A. Farag, ``Free Form Surface Reconstruction using Neural Networks, ''Proceedings of the ANNIE­94, Artificial Neural Networks in Engineering, Rolla, Missouri, November 1994. Appeared in C. H. Dagli, et al., Eds, Intelligent Engineering Systems Through Artificial Neural Networks, Vol. 4, pp. 51­56, ASME Press, New York, 1994.

  3. M. N. Ahmed and A. A. Farag, ``Application of Functional Link Neural Networks in Free Form Surface Reconstruction,'' Proceedings of the International Society for Optical Engineering; SPIE, Intelligent Robotics and Computer Vision XII, Boston, MA, October 1994.

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     1993

  1. Y. M. Kadah, A. A. Farag, A. Youssef, and A. Badawi, ``Statistical and Neural Classifiers for Ultrasound Tissue Characterization,'' Proceedings of the ANNIE­93, Artificial Neural Networks in Engineering, Rolla, Missouri, November 1993. Appeared in C. H. Dagli, et al., Eds, Intelligent Engineering Systems Through Artificial Neural Networks, Vol. 3, pp. 397­402, ASME Press, New York, 1993.

  2. Y. M. Kadah, A. A. Farag, A. Youssef, and A. Badawi, ``Automatic Tissue Characterization from Ultrasound Imagery,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 2025: Intelligent Robotics and Computer Vision XII, pp. 283­294, November 1993.

  3. A. A. Farag and Bin Wang, ``On Wavelet Image Representation and Application in Computer Vision,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 2025: Intelligent Robotics and Computer Vision XII, pp. 450­462, November 1993.

  4. A. A. Farag, ``On the Fusion of Apriori Information in Sequential Boundary Allocation Algorithms,'' Proceedings of the U.S. Army Data Fusion Workshop, George Mason University, Harpers Ferry, West Virginia, June 1993.  

  5. A. A. Farag, E. J. Delp, B. Wang, and D. M. Rose ``Local Estimation of Gaussian­based Edge Enhancement Filters Using Fourier Analysis,'' Proceedings of the IEEE International Conference on Acoustics Speech and Signal Processing, ICASSP­92, Minneapolis, MN, April 1993.

  6. A. A. Farag, Yuen­Pin Yeap, and Frank P. Kuhl, ``Some Recent Advances in Statistical Texture Modeling, Simulation, and Segmentation,'' Proceedings of the American Society for Photometry and Remote Sensing (ASPRS), Vol. 3, pp. 96­106, 1993.

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     1992

  1. A. A. Farag and E. J. Delp, ``Image Segmentation Based on Composite Random Field Models,'' Journal of Optical Engineering, Vol. 12, pp. 2594­2607, December 1992.

  2. A. A. Farag, ``Edge­based Image Segmentation," Remote Sensing Reviews, Vol. 6(1), pp. 95­120, 1992.

  3. A. G. Farman, A. A. Farag, and Yuen­Pin Yeap, ``Communication in Dental Radiology,'' Dento Maxillo Facial Radiology, Vol. 21(3), pp. 213­215, November 1992.

  4. A. A. Farag, ``MAP Region Segmentation Based on Composite Random Field Models,'' Proceedings of the IEEE International Conference on Acoustics Speech and Signal Processing, ICASSP­92, San Francisco, CA, Vol. 3, pp. 49­52, March 1992.

  5. A. A. Farag, Y. Cao, and Y. P. Yeap, ``Integrating A Priori Information in Edge Linking Algorithms,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 1700: Automatic Object Recognition, pp. 380­394, April 1992.

  6. Y. P. Yeap, E. D. Jansing, and A. A. Farag ``An Empirical Investigation of Iterative Maximum Entropy Spectral Estimation of One­dimensional Random Process,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 1700: Automatic Object Recognition, pp. 395­405, April 1992.

  7. A. G. Farman and A. A. Farag, ``Direct Digital Radiography with Image Enhancements for Maxillofacial Diagnosis,'' Proceedings of the VIth Biennial Congress of the International Association of Oral Pathologists, Hamburg, Germany, July 1992.

  8. A. A. Farag and Y. P. Yeap, ``On the Effects of the Gibbs­Markov Model Parameters on MAP Region Segmentation Using Dynamic Programming,'' 1992 IEEE International Conference on Systems, Man, and Cybernetics, Chicago, IL, pp. 1670­1675, October 1992.

  9. A. A. Farag, E. J. Delp, Y. Cao, and D. M. Rose ``On Empirical Estimation of the Parameters of Edge Enhancement Filters,'' 1992 IEEE International Conference on Systems, Man, and Cybernetics, Chicago, IL, pp. 346­350, October 1992.

  10. P. K. Sahoo, A. A. Farag, and Y. P. Yeap, ``Threshold Selection based on Histogram Modeling,'' 1992 IEEE International Conference on Systems, Man, and Cybernetics, Chicago, IL, pp. 351­356, October 1992.

  11. A. A. Farag, Y. P. Yeap, and E. J. Delp, ``Effects of Clique Potentials on Maximum A Posteriori Region Segmentation,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 1825: Intelligent Robotics and Computer Vision XI, pp. 325­337, November 1992.

  12. E. D. Jansing, Y. P. Yeap, and A. A. Farag, ``Convergence Properties of Iterative Maximum Entropy Spectral Estimation,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 1824: Applications of Signal and Image Processing in Explosives Detection Systems, pp. 183­193, November 1992.

  13. A. A. Farag and D. M. Rose, ``Experiments in Bayesian and Neural Pattern Recognition with Applications to Textured Image Classification,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 1827: Model­Based Vision, pp. 88­95, November 1992.

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     1991

  1. A. A. Farag and E. J. Delp, ``A Path Metric for Sequential Search and its Applications in Edge Linking,'' 1991 IEEE International Conference on Systems, Man, and Cybernetics, Charlottesville, Va., pp. 563­569, October 1991.

  2. A. A. Farag and E. J. Delp, "A Stochastic Modeling Approach to Region Segmentation,'' Proceedings of the International Society for Optical Engineering, SPIE, Vol. 1609: Model­Based Vision and Tools: pp. 87­110, November 1991.

  3. A. A. Farag and E. J. Delp, "Edge Linking by Sequential Search,'' Proceedings of the International Society for Optical Engineering; SPIE, Vol. 1609: Model­Based Vision and Tools, pp. 198­216, November 1991.

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